Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_022666
Parameters: 2 7 7 80 10 50 500
Length:  476091

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25563--25633
22
3.2
22
78
7
81
36
23
16
22
1.94
25971--26110
70
2.0
70
100
0
280
37
22
21
18
1.94
29842--29866
13
1.9
13
100
0
50
52
0
24
24
1.48
59103--59127
12
2.1
12
100
0
50
44
8
16
32
1.76
85460--85500
19
2.2
19
90
0
64
29
14
43
12
1.82
93471--93513
21
2.0
21
90
0
68
27
25
18
27
1.98
95910--95941
16
2.0
16
100
0
64
56
0
31
12
1.37
127046--127114
35
2.0
35
100
0
138
36
11
26
26
1.90
131818--131897
39
2.1
39
90
0
124
37
21
20
21
1.94
134589--134614
6
4.3
6
100
0
52
15
19
0
65
1.27
145750--145783
17
2.0
17
100
0
68
41
23
23
11
1.87
171199--171224
12
2.2
12
100
0
52
57
15
0
26
1.38
182875--182902
11
2.5
11
100
0
56
71
0
21
7
1.09
232249--232302
21
2.6
21
75
0
63
37
22
27
12
1.91
258388--258429
21
2.0
22
86
13
61
23
14
19
42
1.87
261760--261821
31
2.0
31
100
0
124
16
22
29
32
1.95
263241--263278
19
2.0
19
100
0
76
26
21
15
36
1.93
265987--266019
16
2.1
16
100
0
66
39
12
30
18
1.87
289012--289079
35
2.1
33
89
10
104
35
14
47
2
1.60
293109--293166
29
2.0
29
96
0
107
17
29
13
39
1.88
309128--309167
18
2.3
18
91
4
64
15
47
27
10
1.77
380852--380894
21
2.0
21
95
0
77
37
4
23
34
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
413645--413827
57
3.2
57
96
3
348
36
14
33
14
1.87
420622--420651
15
2.0
15
100
0
60
20
26
13
40
1.89
426020--426053
16
2.1
16
94
0
59
47
14
11
26
1.79
432025--432049
13
1.9
13
100
0
50
24
24
0
52
1.48
435781--435920
70
2.0
70
100
0
280
18
21
22
37
1.94
436258--436328
22
3.2
22
78
7
81
22
16
23
36
1.94
445415--445449
17
2.1
17
100
0
70
37
11
22
28
1.89
458385--458556
30
5.7
30
89
0
245
37
16
18
26
1.92
458385--458556
90
1.9
90
93
0
299
37
16
18
26
1.92
458690--458752
18
3.5
18
91
0
99
34
11
14
39
1.81

Tables:   1

The End!