Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_056358
Parameters: 2 7 7 80 10 50 500
Length:  425282

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--25
5
5.0
5
100
0
50
60
0
0
40
0.97
3009--3034
12
2.2
12
100
0
52
42
7
15
34
1.75
123308--123355
21
2.3
21
78
7
53
16
22
22
37
1.94
126302--126356
5
11.0
5
96
0
101
40
18
1
40
1.61
136988--137025
13
3.0
13
84
3
51
5
44
0
50
1.24
141393--141510
39
3.0
39
98
0
227
21
27
19
31
1.97
159356--159407
24
2.2
24
92
0
86
46
19
9
25
1.80
159776--159879
38
2.7
38
98
0
199
31
13
14
40
1.85
163267--163297
12
2.7
11
95
5
53
48
6
0
45
1.28
185799--185846
14
3.1
17
77
17
50
52
10
8
29
1.65
186327--186364
17
2.2
18
86
9
53
76
0
2
21
0.91
186492--186528
16
2.3
16
95
0
65
13
16
27
43
1.85
188331--188364
17
2.0
17
94
0
59
38
11
14
35
1.83
193708--193764
18
3.2
18
84
0
69
31
22
10
35
1.88
196085--196174
21
4.1
22
75
8
76
54
10
23
12
1.67
235499--235534
17
2.1
17
94
0
63
38
13
5
41
1.68
238268--238298
5
6.2
5
100
0
62
0
0
19
80
0.71
257992--258022
6
5.2
6
100
0
62
67
0
16
16
1.23
273339--273366
10
2.8
10
100
0
56
21
25
21
32
1.98
299554--299585
16
2.0
16
93
0
55
34
31
9
25
1.87
305150--305194
5
9.0
5
100
0
90
20
0
20
60
1.37
326433--326477
5
9.0
5
100
0
90
20
20
0
60
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
340178--340223
23
2.0
23
91
0
74
32
21
26
19
1.97
343824--343870
24
2.0
24
91
8
78
25
19
17
38
1.92
349371--349413
12
3.5
12
87
6
68
46
4
0
48
1.22
362916--362947
16
2.0
16
100
0
64
62
6
12
18
1.50
363796--363843
6
8.0
6
100
0
96
33
16
0
50
1.46
368373--368422
25
2.0
25
100
0
100
32
20
16
32
1.94
386910--386970
5
12.2
5
100
0
122
40
19
0
39
1.52
414502--414532
10
3.1
10
100
0
62
19
19
19
41
1.90
418689--418714
8
3.2
8
100
0
52
26
0
23
50
1.50
425198--425282
5
17.0
5
100
0
170
60
0
0
40
0.97

Tables:   1

The End!