Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: MT122970
Parameters: 2 7 7 80 10 50 500
Length:  481443

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1584--1610
9
3.0
9
100
0
54
22
33
0
44
1.53
20879--20903
12
2.1
12
100
0
50
32
8
16
44
1.76
30085--30121
8
4.6
8
86
0
56
8
18
0
72
1.08
30085--30121
16
2.3
16
100
0
74
8
18
0
72
1.08
69043--69100
30
2.0
29
83
9
75
29
24
8
37
1.85
140142--140183
22
1.9
22
85
9
59
7
38
14
40
1.73
147528--147572
17
2.6
17
89
0
72
24
4
42
28
1.74
150371--150403
16
2.1
16
100
0
66
30
18
18
33
1.94
151921--151990
18
3.7
18
78
17
70
35
5
8
50
1.57
151921--152001
40
2.0
42
85
9
114
35
4
9
49
1.58
151955--151995
18
2.3
18
100
0
82
39
4
12
43
1.63
170214--170246
7
4.6
7
92
7
57
54
0
3
42
1.15
170214--170249
15
2.5
15
95
4
65
52
0
5
41
1.24
203459--203496
19
2.0
19
89
0
58
28
13
18
39
1.88
208780--208817
20
1.9
20
94
0
67
10
28
26
34
1.90
238242--238306
27
2.4
27
97
0
121
32
13
35
18
1.90
241284--241314
16
2.0
16
93
6
55
51
12
16
19
1.76
249002--249036
17
2.1
17
100
0
70
28
28
5
37
1.80
262219--262249
15
2.1
15
100
0
62
54
0
19
25
1.44
271820--271847
7
4.0
7
100
0
56
28
14
14
42
1.84
274341--274621
155
1.8
156
82
4
370
27
15
21
35
1.94
312874--312933
18
3.3
18
88
0
93
33
25
10
31
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
315286--315375
21
4.1
22
77
8
85
55
10
21
13
1.66
317678--317711
17
2.0
17
88
0
50
29
20
11
38
1.88
337083--337152
19
3.7
19
76
3
79
17
27
30
25
1.97
384036--384119
11
7.6
11
69
9
55
35
2
27
34
1.70
384026--384084
22
2.6
22
71
12
57
33
0
32
33
1.58
398114--398160
24
2.0
24
86
0
67
27
21
27
23
1.99
471215--471257
21
2.1
20
82
4
50
18
16
20
44
1.87

Tables:   1

The End!