Specifications
==============

Sequence source file: "/home/xyzhang/pmgdraw/PMGview/media/downloads/20230426113744_73/MZ826165/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           287410
Total number of identified SSRs:                 32
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    1


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	25
2	5
3	1
5	1

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	total
A	-	-	-	-	-	4	2	1			7
C	-	-	-	-	-	1					1
G	-	-	-	-	-	3				1	4
T	-	-	-	-	-	9	1	2	1		13
AT	-	2									2
TA	-	2			1						3
AAG	1										1
TAAAG				1							1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	total
A/T	-	-	-	-	-	13	3	3	1		20
C/G	-	-	-	-	-	4				1	5
AT/AT	-	4			1						5
AAG/CTT	1										1
AAAGT/ACTTT				1							1