Specifications
==============

Sequence source file: "/home/xyzhang/pmgdraw/PMGview/media/downloads/20230426110905_49/MF611847/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           379060
Total number of identified SSRs:                 29
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    1


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	22
2	6
3	1

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	total
A	-	-	-	-	-	5	2	2	1		10
G	-	-	-	-	-	1					1
T	-	-	-	-	-	7	1	2		1	11
AG	-	1									1
AT	-				1						1
CA	-	2									2
TA	-	1									1
TC	-	1									1
AAT	1										1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	total
A/T	-	-	-	-	-	12	3	4	1	1	21
C/G	-	-	-	-	-	1					1
AC/GT	-	2									2
AG/CT	-	2									2
AT/AT	-	1			1						2
AAT/ATT	1										1