Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: MH410146
Parameters: 2 7 7 80 10 50 500
Length:  614836

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13545--13593
24
2.0
24
92
0
80
14
18
38
28
1.90
32112--32139
13
2.2
13
100
0
56
35
7
25
32
1.83
77054--77085
13
2.6
12
90
9
55
37
9
0
53
1.34
82630--82666
18
2.1
18
100
0
74
48
16
13
21
1.80
104040--104105
33
2.0
33
100
0
132
27
36
6
30
1.81
104984--105013
11
2.7
11
89
0
51
63
10
16
10
1.51
106921--106945
7
3.6
7
100
0
50
0
0
28
72
0.86
107104--107216
32
3.5
32
82
4
147
29
15
14
40
1.87
134434--134498
22
3.3
19
87
8
78
55
4
18
21
1.60
134478--134506
14
2.1
14
100
0
58
48
6
20
24
1.74
136967--137002
11
3.3
11
100
0
72
44
0
36
19
1.51
136999--137053
17
3.2
17
86
2
74
36
0
34
29
1.58
142575--142600
8
3.2
8
100
0
52
15
11
0
73
1.11
173093--173119
13
2.1
13
100
0
54
22
40
0
37
1.54
185406--185460
26
2.2
25
81
9
67
36
16
20
27
1.93
185889--185937
24
2.0
24
100
0
98
26
16
32
24
1.96
186156--186227
36
2.0
36
100
0
144
30
16
19
33
1.94
186318--186381
31
2.1
31
93
0
110
34
17
28
20
1.95
186378--186442
32
2.0
32
100
0
130
21
15
21
41
1.90
186495--186521
14
1.9
14
100
0
54
37
7
22
33
1.82
187903--187952
22
2.3
22
100
0
100
48
4
14
34
1.62
193404--193441
18
2.1
19
95
5
69
31
10
31
26
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
230634--230673
20
2.0
20
95
0
71
22
30
7
40
1.81
232275--232310
15
2.3
16
95
4
65
27
19
13
38
1.90
298830--298919
21
4.1
22
75
8
76
54
8
24
12
1.66
307358--307428
31
2.4
31
82
15
87
52
1
0
46
1.09
314812--314863
26
2.0
27
84
3
70
23
28
7
40
1.82
324468--324494
13
2.1
13
100
0
54
22
7
14
55
1.64
338275--338299
13
1.9
13
100
0
50
0
28
16
56
1.41
340981--341029
23
2.1
23
88
0
71
28
24
12
34
1.91
347741--347780
21
2.0
21
85
5
55
70
5
17
7
1.30
435913--435939
14
1.9
14
100
0
54
66
11
14
7
1.43
521893--521924
2
17.0
2
87
12
50
46
0
0
53
1.00
560052--560078
14
1.9
14
100
0
54
7
14
11
66
1.43
612384--612432
24
2.0
24
100
0
98
26
16
32
24
1.96
612651--612722
36
2.0
36
100
0
144
30
16
19
33
1.94
612813--612876
31
2.1
31
93
0
110
34
17
28
20
1.95
612873--612937
32
2.0
32
100
0
130
21
15
21
41
1.90
612990--613016
14
1.9
14
100
0
54
37
7
22
33
1.82
614398--614447
22
2.3
22
100
0
100
48
4
14
34
1.62

Tables:   1

The End!