Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_060546
Parameters: 2 7 7 80 10 50 500
Length:  104716

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8663--8710
24
2.0
24
100
0
96
29
12
16
41
1.85
22712--22751
20
2.0
20
100
0
80
25
5
20
50
1.68
33129--33155
14
1.9
14
100
0
54
40
14
14
29
1.86
33799--33848
25
2.0
25
100
0
100
48
16
12
24
1.79
34149--34216
33
2.1
33
97
0
127
38
27
17
16
1.91
34252--34314
33
1.9
33
96
0
117
7
28
38
25
1.84
39065--39310
30
8.4
31
79
9
176
49
10
4
35
1.58
39174--39310
30
4.5
30
90
0
202
50
9
3
36
1.53
39235--39291
15
3.8
16
70
11
57
52
8
0
38
1.33
39094--39258
83
2.0
83
84
4
217
50
10
5
33
1.59
42127--42190
17
4.0
17
76
15
82
50
15
6
28
1.68
42316--42465
81
1.9
81
92
2
257
28
24
18
28
1.98
63127--63205
6
13.2
6
87
0
104
34
40
0
25
1.56
63130--63205
12
6.3
12
89
0
116
34
40
0
25
1.56
63130--63205
18
4.2
18
87
0
116
34
40
0
25
1.56
73092--73137
24
1.9
24
100
0
92
15
23
43
17
1.87
75121--75146
2
13.0
2
100
0
52
50
0
0
50
1.00
78520--78569
10
5.0
10
100
0
100
10
20
30
40
1.85
87325--87372
21
2.3
21
85
7
62
52
12
14
20
1.74
87335--87377
21
2.0
21
100
0
86
48
9
18
23
1.76

Tables:   1

The End!