Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_056359
Parameters: 2 7 7 80 10 50 500
Length:  303026

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16368--16409
20
2.1
20
95
0
75
30
21
4
42
1.73
33333--33364
15
2.1
15
100
0
64
65
0
12
21
1.25
54069--54102
16
2.2
15
94
5
59
47
5
0
47
1.26
110374--110405
15
2.1
15
100
0
64
53
0
34
12
1.39
123994--124038
15
3.0
15
81
12
65
77
4
17
0
0.92
128320--128381
32
2.0
30
81
12
72
29
25
22
22
1.99
138873--138909
6
6.2
6
100
0
74
32
16
16
35
1.91
145493--145529
16
2.4
16
86
13
51
56
2
21
18
1.54
148069--148097
15
1.9
15
100
0
58
27
24
13
34
1.93
178854--178889
18
2.0
18
94
0
63
16
13
11
58
1.63
181580--181625
19
2.4
19
96
0
83
23
26
4
45
1.71
214003--214050
24
2.0
24
100
0
96
58
4
16
20
1.55
214005--214056
24
2.2
24
93
3
88
63
3
17
15
1.45
219788--219919
69
1.9
70
87
4
196
21
18
10
48
1.78
219804--219983
69
2.6
69
78
6
168
25
17
14
42
1.87
225128--225170
18
2.4
19
81
18
56
37
25
18
18
1.94
255971--255996
13
2.0
13
100
0
52
30
38
7
23
1.83
258967--259023
18
3.2
18
92
5
89
35
28
7
29
1.83
261385--261474
21
4.1
21
82
5
90
57
7
22
12
1.60
263800--263836
9
4.1
9
100
0
74
43
10
10
35
1.75
263848--263882
15
2.3
15
100
0
70
45
22
5
25
1.74
273864--273956
43
2.2
43
98
0
177
12
12
10
63
1.52

Tables:   1

The End!