Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_052708
Parameters: 2 7 7 80 10 50 500
Length:  735173

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98669--98750
36
2.3
36
97
0
155
8
23
9
58
1.57
112016--112068
26
2.0
26
100
0
106
26
22
7
43
1.80
153124--153153
3
9.7
3
92
7
51
70
0
0
30
0.88
153127--153154
13
2.2
13
100
0
56
71
0
0
28
0.86
201542--201581
19
2.1
19
100
0
80
52
5
10
32
1.56
201550--201593
19
2.3
19
88
0
61
61
4
13
20
1.50
293593--293640
24
2.0
24
87
0
69
22
27
22
27
1.99
308017--308069
19
2.9
19
66
23
51
49
13
5
32
1.65
332182--332235
19
3.0
19
74
20
62
35
5
9
50
1.58
332203--332252
21
2.5
19
87
9
64
38
6
2
54
1.37
368181--368206
13
2.0
13
100
0
52
46
15
23
15
1.83
372028--372066
19
2.1
19
85
9
53
0
15
12
71
1.14
383578--383612
17
2.1
17
100
0
70
48
5
22
22
1.72
417502--417527
12
2.2
12
100
0
52
15
19
26
38
1.91
426169--426196
14
2.0
14
100
0
56
57
7
14
21
1.61
439334--439363
15
2.0
15
100
0
60
20
13
0
66
1.24
440952--440990
20
2.0
20
85
10
53
53
7
25
12
1.65
446563--446591
13
2.2
13
100
0
58
55
6
17
20
1.65
458702--458760
29
2.0
29
100
0
118
30
13
23
32
1.93
497258--497347
28
3.2
28
100
0
180
6
48
20
24
1.73
532494--532541
25
1.9
25
86
0
69
29
14
39
16
1.88
534396--534440
22
2.0
22
100
0
90
17
17
22
42
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
573745--573773
14
2.1
14
100
0
58
34
0
34
31
1.58
694252--694290
20
2.0
19
85
5
51
28
10
35
25
1.89
704484--704530
23
2.0
23
100
0
94
29
17
27
25
1.97
725262--725319
28
2.1
28
100
0
116
56
3
10
29
1.49

Tables:   1

The End!