Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NC_037041
Parameters: 2 7 7 80 10 50 500
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 500
Length: 142510
ACGTcount: A:0.27, C:0.22, G:0.23, T:0.28
Found at i:12830 original size:16 final size:16
Alignment explanation
Indices: 12809--12840 Score: 64
Period size: 16 Copynumber: 2.0 Consensus size: 16
12799 TTGGGTAGAG
12809 TTTTTACATATATCAT
1 TTTTTACATATATCAT
12825 TTTTTACATATATCAT
1 TTTTTACATATATCAT
12841 CACGAGTCTC
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 16 1.00
ACGTcount: A:0.31, C:0.12, G:0.00, T:0.56
Consensus pattern (16 bp):
TTTTTACATATATCAT
Left flanking sequence: Indices 12309 -- 12808
TTTATTGCTCAATCCGGTATAAGGAAACCCCCCGGGAAAGAACAATGTCCACCGTTTACTGTTTC
TTCGCAAATATTTGACTCCTTTACTTGGATATACGAAAATTATATCAGTCTGTGCGTAGTACTTT
TTTTCCCGATCGCCGTTACCATGCTAGACTTCTCGGATATTAACTACTATGTTGCTTTCTCTAAC
CCCCTCCTTTTTCGTATATCATTTTATTTAATTTATCTCCCGGGACCGCGATCCAGCTATAAAAG
AATGGCTTATTGACAATCAACCAATAAATTTCAATAAATACTATCCTATCTATGCCTTTTCAAAG
ATTTTTGGTACAATCCCGCTTTTATGTAAATACTTATTGTAAGCTTACGAGGTTTCAGATACATT
ATCTAAAACCTTGGAGGCAAAAGGGATAAAACCGAAAGAAGAAAGGGAGCACGTCTGCCGTATAA
TGGGAATCATTGATGGCGCTTTGAAAGAGGGATATTTGGGTAGAG
Right flanking sequence: Indices 12841 -- 13340
CACGAGTCTCTATTTTGTTTTCCAAATAGCCATAACAATCGAAGGGTCCAAGGTCTGGCCGCCCA
TCTGACCTCAGCAAAGAGACGGAAGTAACACCCGCGCAGGAGTGGCCAATCCAACCGGTTACTGA
AGAGGTCGGTGAAGTCTTCCCCAACGGGCCACAAGATTAGATGAATGGTTAAATCTTGACGATTT
TCATCCATTCATCTAATGGCGTTCCCACCCATTTCTCCAATATGGTGGCCCAGAACTCCTGTAGG
ATCTATTACTTCGTGAACTCATATGATTAAATATTATTATTTGCTCCAAATTTCCGGATTTAACT
CTTACCTCAATCTCCTGATTTATGGATTCAATCTCTCGACTTATGGATTCAATCCCTCGATTTAT
GGATTCGTCGTATATGCATATATAATGATTCTAATTTGCTCCCACCCAAATTTCCCGATTTATCT
ATTATTATTTCTGTATACACGAAATGGAAGCCTTATGTTATCCGT
Found at i:13198 original size:21 final size:22
Alignment explanation
Indices: 13172--13236 Score: 100
Period size: 21 Copynumber: 3.1 Consensus size: 22
13162 AACTCTTACC
13172 TCAATCTCCT-GATTTATGGAT
1 TCAATCTCCTCGATTTATGGAT
*
13193 TCAATCT-CTCGACTTATGGAT
1 TCAATCTCCTCGATTTATGGAT
13214 TCAATC-CCTCGATTTATGGAT
1 TCAATCTCCTCGATTTATGGAT
13235 TC
1 TC
13237 GTCGTATATG
Statistics
Matches: 40, Mismatches: 2, Indels: 4
0.87 0.04 0.09
Matches are distributed among these distances:
20 2 0.05
21 38 0.95
ACGTcount: A:0.23, C:0.23, G:0.14, T:0.40
Consensus pattern (22 bp):
TCAATCTCCTCGATTTATGGAT
Left flanking sequence: Indices 12672 -- 13171
GTAAGCTTACGAGGTTTCAGATACATTATCTAAAACCTTGGAGGCAAAAGGGATAAAACCGAAAG
AAGAAAGGGAGCACGTCTGCCGTATAATGGGAATCATTGATGGCGCTTTGAAAGAGGGATATTTG
GGTAGAGTTTTTACATATATCATTTTTTACATATATCATCACGAGTCTCTATTTTGTTTTCCAAA
TAGCCATAACAATCGAAGGGTCCAAGGTCTGGCCGCCCATCTGACCTCAGCAAAGAGACGGAAGT
AACACCCGCGCAGGAGTGGCCAATCCAACCGGTTACTGAAGAGGTCGGTGAAGTCTTCCCCAACG
GGCCACAAGATTAGATGAATGGTTAAATCTTGACGATTTTCATCCATTCATCTAATGGCGTTCCC
ACCCATTTCTCCAATATGGTGGCCCAGAACTCCTGTAGGATCTATTACTTCGTGAACTCATATGA
TTAAATATTATTATTTGCTCCAAATTTCCGGATTTAACTCTTACC
Right flanking sequence: Indices 13237 -- 13736
GTCGTATATGCATATATAATGATTCTAATTTGCTCCCACCCAAATTTCCCGATTTATCTATTATT
ATTTCTGTATACACGAAATGGAAGCCTTATGTTATCCGTGCTCCATTACGTTTTCCTCTTCCATC
ATCTCTCTACCCGGCTCGGTCTTCCGTTTCATATTATTTTTTTTCCAAATAGCATCTCATATGCG
TTTGTGCCGACGCTGTTGCGAAAATATTTTATTTGCCATGGATCTGGTTCTTTATTGGACGATTT
CATCGACTCGATATAATTGGCTGCATCCACCTTGTTCTTATCTCAATGGTTTGCCCCTGGTCGAG
TCCTCCATCGAATAATACAACGCTTAAATCCGGTAGACATTCGCGGCTGCTGGATGATCGCTGAT
GTGAGCTGTCGCATAACCCCGATCTACGAAGTGTTCCACAAATCGCTTTGTCATTACCTCGAAGG
AACCGCAAAGGCTATAATTAAGTTTAGAACGTATCAACTGCAAAC
Found at i:16665 original size:2 final size:2
Alignment explanation
Indices: 16653--16694 Score: 75
Period size: 2 Copynumber: 21.0 Consensus size: 2
16643 TGAAGCATAA
*
16653 AT AT CT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
16695 CTCTCTCTTT
Statistics
Matches: 38, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
2 38 1.00
ACGTcount: A:0.48, C:0.02, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Left flanking sequence: Indices 16153 -- 16652
CGAGTGCCTTTTAGGCCATAGGGTTCGGGTTAAGGCTTGCAGGGGGGCTCGGGTAGACCCGAAGG
TGCGTAAGCACTTTTTTTTTCGTCAAAAGGATAAAAAATTTTTTAATTTCGTTTTCCATCCCCCC
AACGAAAATAGCAAGAAAATTTCACCGAGAGCTAGTCTTTGATTGATTGCTAATCGAAAAACAAT
CGCTTGATGGTTGATTACTAGCGCGTTATACTGACCGTACGAGGCTAGACTGCGGGACTGCGATC
GAGATGTTGACCGACACAGTACTTGGCGGGAAACTGTAACGGAAAAAAAATATATAGATTTTTCT
GCCCGTAGGGCGTAGCACTCTGAGGTAGGTTTTATTTAAGTGAGATCTAGGGACGTTAAGGGGGG
GTCGAAAAAGGGCAGTTTTCTGGCACGAACGGCTAATAACGCAATACGCTGGTCATGCGGCTATT
TACGATGCTTTATACCGCAGCTTAAGCTAATAGGATGAAGCATAA
Right flanking sequence: Indices 16695 -- 17194
CTCTCTCTTTTATATTTATCCCGCAGCGATCAAGCGTATACGACACGTAGTGCTTAAGAATAGCC
AACTAGTGCTTGTAGCTCAATTGGATAGAGCACCAAACTACGGATTTGGGGGTTGAGAGTTCGAA
TCTTTCCAAGCATGGGCCTATCCATCGGATTGGACTAAGAGAATACGTCATATAAGTAGAGGATA
CGTCAGATAAGTAGAGAATAACTAGTTCCAAGCAGACGTTCTTTAGCTCTGCCGCTGCGGGAAAG
GCTGCGAGAAATAAAAAAAAAGAAATATATATACCTACGTCCCCCGACTAATGGCTTAAGCACAC
TGTGCTCTTGTATTGTCCGACTATTATGGACTCGTGGCGCCGAGAGAAAGATGGGGTTCCAAATC
GTAAATGGTCCCTGGGAGTGGTGTAAACTATCGCCAGTTTGGTAATTTTCCCATACATGTGGTGG
ACTGCTCGCCGCAGGTACCACTAGAGCCTGGTGGCTTTACCCCAA
Found at i:16890 original size:20 final size:20
Alignment explanation
Indices: 16862--16909 Score: 78
Period size: 20 Copynumber: 2.4 Consensus size: 20
16852 GATTGGACTA
*
16862 AGAGAATACGTCATATAAGT
1 AGAGAATACGTCAGATAAGT
*
16882 AGAGGATACGTCAGATAAGT
1 AGAGAATACGTCAGATAAGT
16902 AGAGAATA
1 AGAGAATA
16910 ACTAGTTCCA
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
20 25 1.00
ACGTcount: A:0.46, C:0.08, G:0.25, T:0.21
Consensus pattern (20 bp):
AGAGAATACGTCAGATAAGT
Left flanking sequence: Indices 16362 -- 16861
TTACTAGCGCGTTATACTGACCGTACGAGGCTAGACTGCGGGACTGCGATCGAGATGTTGACCGA
CACAGTACTTGGCGGGAAACTGTAACGGAAAAAAAATATATAGATTTTTCTGCCCGTAGGGCGTA
GCACTCTGAGGTAGGTTTTATTTAAGTGAGATCTAGGGACGTTAAGGGGGGGTCGAAAAAGGGCA
GTTTTCTGGCACGAACGGCTAATAACGCAATACGCTGGTCATGCGGCTATTTACGATGCTTTATA
CCGCAGCTTAAGCTAATAGGATGAAGCATAAATATCTATATATATATATATATATATATATATAT
ATATATATCTCTCTCTTTTATATTTATCCCGCAGCGATCAAGCGTATACGACACGTAGTGCTTAA
GAATAGCCAACTAGTGCTTGTAGCTCAATTGGATAGAGCACCAAACTACGGATTTGGGGGTTGAG
AGTTCGAATCTTTCCAAGCATGGGCCTATCCATCGGATTGGACTA
Right flanking sequence: Indices 16910 -- 17409
ACTAGTTCCAAGCAGACGTTCTTTAGCTCTGCCGCTGCGGGAAAGGCTGCGAGAAATAAAAAAAA
AGAAATATATATACCTACGTCCCCCGACTAATGGCTTAAGCACACTGTGCTCTTGTATTGTCCGA
CTATTATGGACTCGTGGCGCCGAGAGAAAGATGGGGTTCCAAATCGTAAATGGTCCCTGGGAGTG
GTGTAAACTATCGCCAGTTTGGTAATTTTCCCATACATGTGGTGGACTGCTCGCCGCAGGTACCA
CTAGAGCCTGGTGGCTTTACCCCAAAATTCGGTATAGGACTAGATATGAGTATTAAATTACTCGG
CCTCCCCCAGTCTCTGGCTCCGGGAGAGGGGGGCCGAGATCCAAGGCCTGACTGGTCCGCCGTGA
GGCGGACGGAGGGAGGAGCCATCAGACCCTGTGCCAAGTCATGTATATATATCTCAATCTATGGC
GGAAGTAGCTTAATGGTAGAGTATAGCCTTGCCAAGGCTAAGGTT
Found at i:37096 original size:2 final size:2
Alignment explanation
Indices: 37091--37138 Score: 64
Period size: 2 Copynumber: 25.0 Consensus size: 2
37081 CCGAGAAAAA
* *
37091 AT AT AT AA AT AT AT AT AT AT AT AT AT AT AT -T A- AC AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
37131 AT AT AT AT
1 AT AT AT AT
37139 GCTGCGCCCG
Statistics
Matches: 41, Mismatches: 3, Indels: 4
0.85 0.06 0.08
Matches are distributed among these distances:
1 2 0.05
2 39 0.95
ACGTcount: A:0.52, C:0.02, G:0.00, T:0.46
Consensus pattern (2 bp):
AT
Left flanking sequence: Indices 36591 -- 37090
GACCGATACGGTACGCTATGGGGTTTGCTCCCTGTTAAGCCTTTGGATCTCTAGCTATGAGAAAA
AGCGAACAGTCGTACAAAGCGGCTTGAAAGTCCTCTAGCTTCTCTATCAAGCTATCGGGTACGGC
GCAGCACAAAACAGTTTTAATTCACTCGGTCCACCTGCCCTGGCTCCCCCTGCGAAACTTCCCAA
GGATGCTCGAACTCTGCAAGGCGATAAGTATAAACTCTGGAATCGCTAAAAAAGCGGAGCAGCCC
GACAAATACGAGATCATTCTATGCCCTGCCTCGCGTGGCTCCGGCTGTTCAGCACTACAAAAAAT
AAAAAAGGCTGCGCATCGACGGACAGCGCGGAATGGAATCATGCTTTTGATACGATGAAGAAACG
TATTCCGTTTATTCGGAGATACCACCTGCCGGAGGCCCATAAGGAAGACCTAGAGGAGATCATTG
AGGAAGACCTAGACGAGATCCTTGGTTTTCGAAAACCGAGAAAAA
Right flanking sequence: Indices 37139 -- 37638
GCTGCGCCCGTAGTGAAAAAGGGCCCAAAGTAAGTAGAGTTAGTGAGCCGTGTAATGGGCAACTA
TTTCGCACGGTTCGGAGGGCACTTCAGTAAGCCCTACATGGGCCGAAGTCTTGACCCCTATTCCT
TTTGATGATGCCAGAAGTCGTTTCGATATACGATTTTATCTCGTTTCTATCTTATTCATTATATC
CGATTCGGAAGTCACCTTTTTATTTCCCTGGGCAGTTTCTCTTAACAAGATTGGTTCGTTTGGAT
TCTGGTCTATGATGGTATTTCTACTTATTTCGACGATTGGATTTGTATATGAATGGAAAAAGGGC
GCTTTAGATTGGGAGTAACTCTTCATTCGCGAAAGCGAATGGAGTGGAAAGAAAAAATATAGCCC
CGTAGGGCTGAAGCTCTCATCGCTCTCTTTCTTTTTCTCCCTCTCCGGATACTTTTTTGGTCCAA
AGGACACGATACCTGCCGGGTATCGTGTGCGGGTTCCAGCCAAAA
Found at i:49005 original size:53 final size:53
Alignment explanation
Indices: 48915--49026 Score: 152
Period size: 53 Copynumber: 2.1 Consensus size: 53
48905 CCTTGGTCCC
* * * *
48915 AAGGGCGGAAGGCCGGAAATGGCTTGACGATTTCCGCACACGATACTGGGAAG
1 AAGGACGGAAGGCCGGAAATGGCTGGACGAGTCCCGCACACGATACTGGGAAG
** * *
48968 AAGGACGGAAGGCCGGAAATGGCTGGTGGAGTCCCGCACACGATATTGGGTAG
1 AAGGACGGAAGGCCGGAAATGGCTGGACGAGTCCCGCACACGATACTGGGAAG
49021 AAGGAC
1 AAGGAC
49027 ACGAGACCCA
Statistics
Matches: 51, Mismatches: 8, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
53 51 1.00
ACGTcount: A:0.29, C:0.20, G:0.38, T:0.14
Consensus pattern (53 bp):
AAGGACGGAAGGCCGGAAATGGCTGGACGAGTCCCGCACACGATACTGGGAAG
Left flanking sequence: Indices 48415 -- 48914
AAGCACTTCGTCTATCGGCATTGTAGAAAGAATCGAATATGACCCAAATCGTTCGTCCCGGATTG
CTCTAGTACGATGGATCGAAGGGGTTCTACGCCCTGGAAAGCACCCGGCTAGAGCGAATAGTCGA
AAAGAAAAAAATATCTTCTTTTTCGGCCTCTTATTCTCGTTCTCTTCGCTGCCTGGACAAGCTCG
GCGAATAAAATACGAAAAAACGAGGCCTAGAGGCGGGCAGATACCGGAAAGTTCTTGGGTCTTAA
GGCCACGGGACCTTGGGGCCAAAAAAGTGGCCTTAAGACCTTTGGGTCTTGGTTTACCCAGCGTA
GCGGTAGCTGGGGCAAAGCCCGCTTTCTTCGCTTTTCGAGGACCTTCCTACCTAACGGGAAGAGA
GCGCCTGTCAGCCCTGAGGGAAGAAAATACGTTCTCTCGAAGCGAAGGCCAAAGATGGAGAACGC
ATAGCGGGGCGCCGAGAATAAAAAGCCTAGTACTTCCTTGGTCCC
Right flanking sequence: Indices 49027 -- 49526
ACGAGACCCAAGGGACAGGCACGTAGTGCTAGACCCTTCTTTCTACAAGCCCGAACATGCTCTCC
GCGCACTCCGTGCCGTCGGGCCTTCGGGTTCGGGTCGAGTGCTACGCACCTCCGAGCCTTTCACT
TATATATTAGCCAGTGAAAAATTGGAAGCAGGCAAGACGGTGATGAATTTTCATTGGTCTAAACT
TTCGACCCCGTTGAACTACCATCAATCTTCCCAGAAAGCTAATGACCCTTCGGGCCTTGGGGTGG
AGACCGCGCGAGATAGCCAAGCTTGGCTACACGGAGACTACGCTTCTGGTGAGAATAAATACATA
CTTGATTCATATTATCAAATGGTCGGAAATTGCATACCATTAGCCAAAATACCTATAGGCACGTG
GGTACATAATATTGAAAGGAACCCAGGTCAAGGCGCAAAGTTTACTCGAGCCGCGGGAACCTTTG
CTCAAATAATTAAGAAAGTTGGTAATACACCACAATGTATTGTGC
Found at i:57341 original size:27 final size:27
Alignment explanation
Indices: 57311--57366 Score: 76
Period size: 27 Copynumber: 2.1 Consensus size: 27
57301 ATGAACACTC
* *
57311 ATGCAAGAAAAGCACGGTATTACTAAT
1 ATGCAAAAAAAACACGGTATTACTAAT
* *
57338 ATGCAAAAAAAACACTGTATTACTTAT
1 ATGCAAAAAAAACACGGTATTACTAAT
57365 AT
1 AT
57367 CCAATCAACT
Statistics
Matches: 25, Mismatches: 4, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
27 25 1.00
ACGTcount: A:0.46, C:0.14, G:0.12, T:0.27
Consensus pattern (27 bp):
ATGCAAAAAAAACACGGTATTACTAAT
Left flanking sequence: Indices 56811 -- 57310
ACAATATCGGAACGAGATTATACATAAAAAACAAGGGAAAAAAAAATAAATCATGTCATATATTT
TGGGGACCAATCTAAATTCCAATAAACAGGTGAAAATTGCCTTAACTCGAATCTTCGGAATTGGG
CCTAAAAAGGCAATTCAAGTTTGTGATCGATTAGGCCTCAGCGATAACATTAAGGTTAATAAGTT
AACCAAGTATCAATTTGACCAAATTCTGGAAATAATAAGTCAAAATTATTTAGTCGATTCGGAAT
TGGAGAGAGTCATTCAGAGAGACATCAAACGATTAATTAGTATTGGTTGTTATCGCGGGTTTCGC
CATAATGCAGGATTGCCCTTACGCGGCCAACGGACTCATACTAATGCTAAGACTTCTCGCAAATT
TAGATACATTTCGATCAGAAGTTGAGAAAAGTTTTTTTCGTTTTTTCGTGAATGGGAAAAAAACG
GAATCGATAATATCGAGCAACACCAAAAACATTCAATGAACACTC
Right flanking sequence: Indices 57367 -- 57866
CCAATCAACTTTTGGTAATACAATCATTACTTTAACGGATTATGACGGAAATACAAAAACTTGGT
CCTCCTCGGGTTCAGTGGGGTTTAAGGGATCTCGTCGCTCAACCAATTATGCTGCTCAAGCAACT
GCAGAAAATGCCGCGCGAGCTGCCATTCAACTTGGATTTAAGTTTGTTGAAGTGAGAATCAAAGG
ATTGGGTTATGGAAAGGAATCTTCGTTGCGTGGTTTAAAACTAGGAGGTCTTATTATTACCAAAA
TCCGCGATGTAACCCCAACGCCACATAATGGATGCCGACCCCCTAAAAAACGTCGTGTTTAAATA
TCATCATAAAGTGCTGTGTCATCATAGAATGGTAAATAGGGGTTCAAGAGTAGAAAAAAATTTTT
TAGGGTCCGAGGGATACTTCTTTGGCTTCACGGGGCTTAGCCCTTCCTTCGTAAAGGCGAAGAAG
GAGATCTACAAGCCATGTCTGGCCTTCGGCGGCCCTTCGGACCCA
Found at i:64456 original size:2 final size:2
Alignment explanation
Indices: 64443--64472 Score: 51
Period size: 2 Copynumber: 15.0 Consensus size: 2
64433 GAAAGAACAA
*
64443 AT AT AT AG AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
64473 TTTTTTATCC
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
2 26 1.00
ACGTcount: A:0.50, C:0.00, G:0.03, T:0.47
Consensus pattern (2 bp):
AT
Left flanking sequence: Indices 63943 -- 64442
CGACATCTCGATGCGAAACGGCCTTGCACAAACAACCGGCCAAGAACTGTAGGCAACACCGGTGA
GGTCCACTTCAGTCATCTGGACGGAGGTGGACGTCAGAGAGCCCGTAGTACTCGCCTACCCGAAG
GGTGAAAAAATAAAAAAATATTTTTTCCCTCGCTAATCGGCGGCACACGGGAAGGGGCTTAAGCG
TCTGCTATATTTTAGCAGATCGGATTCAACCAAAGGGCGAGGGGGGCTCATATAAGAGAATGCTT
GGTTTTATTCCCTCTCACTAGAATCGCGCATGATCGCTATAGTGAGAAAGCAAGTTACTTCATCT
TACTCACGCCACTTGTAGGCCCACATAGGTCACTGGAAGAACAAGCCAAGACCTTGCGACAGAAG
CAAATCCAAAGGAAGGTTGAATCGGAGAGCCGTATGATGGGCGACCATCTCGTACGGTTCGGAGA
GGGCTCGAGTACCAATGCATTCAATATGTGTCTGGGAAAGAACAA
Right flanking sequence: Indices 64473 -- 64972
TTTTTTATCCACTCTATTCAATTGCATGAAGGGTTAAGCACAAAACATGTGCTTCCCCTTTATTT
TTCAAATACGAAGTATACTTGGGAGAGGCAGGATTCGAACCTACGTAGAAAACCTTCAGCAGATT
TACAGTCTGTCGCTTTTAACCACTCGGCCACTCTCCCTATGATAAGTAAGCTTATATTTTACGGC
GGTGCCACGGGACTCCGACGAAAAATAGGTCAATCTACGCGTGTAGCGTTGTTCCTTTCGACTAA
CTAAACAAGTATAAGGATGTACCGTTGGTAGATATTATTCATTCCGCACTTTACGCATCCTACAG
GATTTGAACCTGTGACCTTCAACTTAGAAGGTTGTTGCTCTATCCAACTGAGCTAAGAATGCGCC
ACATTACTAACCACTTTGCAGAAAAAGAGTGAACTCCAGAGAAGAAAGAAGCTTGCTTCTTTCTT
CTCTCCCGCTTTATTCGCATCGCGAACGAAGGCTGAGAGAGAACA
Found at i:78646 original size:15 final size:15
Alignment explanation
Indices: 78626--78654 Score: 58
Period size: 15 Copynumber: 1.9 Consensus size: 15
78616 CTTGTTTCTC
78626 TGATAGCATATGCCG
1 TGATAGCATATGCCG
78641 TGATAGCATATGCC
1 TGATAGCATATGCC
78655 ATTACGTCTT
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 14 1.00
ACGTcount: A:0.28, C:0.21, G:0.24, T:0.28
Consensus pattern (15 bp):
TGATAGCATATGCCG
Left flanking sequence: Indices 78126 -- 78625
GGCTGGGTTCTCTGTATATGGACGATTTACGCCGCTACGCGCATTTCATTCCTTGCGCTACGTGC
CTGCTGCGCTACGCGCCTTAGCCGGCCTAAGGCATGTAGCCTTAGGAGGAGGCTGCCCCTGAATG
AATGGTTAAGTTTTACAAGCCCTCCAGCACTTTCATCAAATTTTCAGTAAGCTCGCCAGAAGTTT
ATATTTCCATTTGAAATGGAAGCCGAAAAATAAAGGGAGTTTACTATATGAATTTGTACTTTTTC
ACCCGGTTACTCATTCCGGTTATATCGCCCAAGCAAATCCCCCGGCCCATCGCTATTTCATAGCC
CGGTCACGGCAAGCATGGTTTTATATTCAATAGATCGCTGGGTAAACAAACATCGATTCCGCCCT
TTTGTCCCTTCGCAAAACCGGATTCGTCCAATACTATTTGTATTATCATCGCCTTCGGCTGTAGG
AATGGTTACGGCACAACTATTACGGGAGATTTATACTTGTTTCTC
Right flanking sequence: Indices 78655 -- 79154
ATTACGTCTTTATTTGTTGAACCCGGGGAACGAAATGGAGTTATTCATATATATAGCATCAGTTT
ACTATATAAGACTCAGGTATAAAATTCTGAATGATAATCAACTCCAATTTTATAGAGCTTATAAG
GATTCTTGGGGCGCTGGCGGTTTGAACGATGCCAACGGCACCCTTTAAAATCGTTCGGATTTAAA
TGGCAAGCGGATACCCAAACGTTACATGGGGAGGAACTGTGGGCTAGCAAACGCAGCGCCCCAAC
ATGCCCCGGAAACATTGCCAGTCGCTACGGGTACGGGCAGACTAGCCACAGTTGTGGCTGTAGGG
GCGTCGGTCGTCGGCATTGCAATCACTAGGACGATCGCGGACTCGAACGGATAAATTCAGAAGTC
AAAAATGGTGGCGCTGAAGGAAAACAGAATTTGGCTAATATGGCGTGGCATTGGAGCTTAAAATG
CCCGAGCACACGGCGGGGACAAGTCATCATAATTTGCTTGAAGAC
Found at i:80366 original size:2 final size:2
Alignment explanation
Indices: 80361--80410 Score: 73
Period size: 2 Copynumber: 25.0 Consensus size: 2
80351 ATGAGCTGCG
* * *
80361 AT AT AT AT AT AT AG AT AT AT CT AT AT AT AT AT AT AG AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
80403 AT AT AT AT
1 AT AT AT AT
80411 GATTTATAGG
Statistics
Matches: 42, Mismatches: 6, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
2 42 1.00
ACGTcount: A:0.48, C:0.02, G:0.04, T:0.46
Consensus pattern (2 bp):
AT
Left flanking sequence: Indices 79861 -- 80360
ATCCACCCGCTAACATGAAGGAAGCATTGCTAAATGACTAAATTTAGCTAATATGACTAAATCCC
GAGGATTTGTAGATAAATATATCTAATGAATACTCCGGAATCCCCATTGCTAATGACACCTTCGC
TAAATGACGCATATTTAGCTAATATAACTAAACGGGGATCCGTACGGAGAGGAATACCCCTTAAT
ATGGAATTGAAGGGTCGGTAAAGGAATATATAATAGGAATCTATATGGGATATGGAAGAATTCCA
TATAATTGGGAAGAGTTAATCAATTGAATTGGAATAAATAGAATGGATTGGGAAATAAAATAAAT
TCAAATATATATATATATACATATATATTTGTGTATAACGGAGAAAATGCATAAATCGAAAAGAT
TCTATTATTTATAGGAGAAACTATTAAATTCATATTTGTTCTTTCTCCGCCCATCTTCCGAAAGA
AAATGAGCTACTATTTTCCTTATTCGAGAGAGACGATGAGCTGCG
Right flanking sequence: Indices 80411 -- 80910
GATTTATAGGTCAGGGTAGGAGATAGCCTTGACCTCTAACCTTCGAAGATACTAAGGGCCTGAAT
CTTCCCCGGGTCGGGTTACCACGTTCTTGAGATCTGTTATATAGGCCTCTAGTTTTCCGTTGGGA
AGGTCCAGAGACTTCCATCGTGAAAGTGACATAGGAACTCCGGGCGGGGATCATGGCACTTCTCC
TAGAACCTTAGGGACGCTTTCGCTAGGAGCCCGAACATATTTTTTTGGTCACGCGGTACGTACGG
CCTGTAGGTCCCGTAACCATCTCGTCCTTATAGAGTTCGTAAACGGTGTCCGCTATATTCCGAAG
ATAAAGAATTATATCTGGTTGTTGGTCGCAGGGCGGGAGACTTGGTTTTGTGCGAGGGACGGCCA
CCACAAAACCGAAAAACTGTCCGACAAAACAAAGGGCACTTACGACCAACTATGCCTCGGAATAC
CCTTCAGTAACCTCTGGCTAATTATATAAATCTCCAAAACCTTTG
Found at i:88122 original size:12 final size:12
Alignment explanation
Indices: 88105--88138 Score: 68
Period size: 12 Copynumber: 2.8 Consensus size: 12
88095 GGCATCGGAG
88105 GGCCCGAAGGGC
1 GGCCCGAAGGGC
88117 GGCCCGAAGGGC
1 GGCCCGAAGGGC
88129 GGCCCGAAGG
1 GGCCCGAAGG
88139 CCCCGAAGGC
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 22 1.00
ACGTcount: A:0.18, C:0.32, G:0.50, T:0.00
Consensus pattern (12 bp):
GGCCCGAAGGGC
Left flanking sequence: Indices 87605 -- 88104
CTCGATGGTATTTCTTACCAGTCTATGCGATTCCTCGAAGTATACCTAACAAATTAGGGGGTGTA
GCCGCCATAGGACTAGTTTTTGTGTCATTATTGGCTCTACCTTTCATTAACACTTCATATGTACG
TAGTTCAAGTTTTCGACCAATTCACCAAAAATTGTTTCGGTTGCTTGTAGCAGATCGCTTGCTTT
TAGGTTGGATTGGATGTCAACCTGTGGAAGCACCATATGTTACTATTGGACAAATCGCTTCAGTG
GGTTTTTTCTTCTATTTTGCTATAATGCCCATTCTTGGCAAATGTGAAGCCAGATTAATCAAAAA
TTTTAATGCTTGCTAGGCCCATAGGGCTAGCAAGCTTTCTTTCGGTTATTGTATTATTGCTGCGC
TACGCGCCTCCGGGCCTATGCAAGGCCTCGTAAGAGGAAGAAAAGCGCGCGCCAAAGGCCCGCGT
CTAATCCAACGATAAAAGGCGCCTTTTATCGTAGCGGCATCGGAG
Right flanking sequence: Indices 88139 -- 88638
CCCCGAAGGCGCTTGAGTAGCGGAACCCCTCCGGGCCTACTACATTGAGAAATAGCAATGATGTA
CTTTACTTTGGGCTTTATACAATTATTGTTAGGCGCTGTGTTATTCATTACCACAGGAGGCGCGT
AGCGGGCGCCGCCTTCGGCGCCTTCTCTCGCGCCGCGCCCTCGGTGCCTCGTCTAGTGAAAGGAG
GAGCCGGCGCCGCTCGAAGGCGCTTAAAAATTGATATATATCAATTTTTGAAAAATATATATATG
AATGAAAAACAAATATATAAATATCTACCAGTTTTACGAAAAAAGAAAGATACGATTTATGGATA
ACCAATTGTTTTTCAAATCTCTAATAGCTACTCCACCGAAAAGGATACATGAATGTCGAACAGTA
TCTAAAGCACCTGAAAACTGCGCGAAGATGCCCGAGAGCATCCAATTCCGAGCATTCGGTGGAAC
CGGTGAACCATTTGTACGTTTGGATTTCCGAATGGGGCAGAGGGC
Found at i:94134 original size:12 final size:12
Alignment explanation
Indices: 94117--94141 Score: 50
Period size: 12 Copynumber: 2.1 Consensus size: 12
94107 TAGCCTCCCC
94117 GTAAGGTCGAGA
1 GTAAGGTCGAGA
94129 GTAAGGTCGAGA
1 GTAAGGTCGAGA
94141 G
1 G
94142 CGCCTTCGGC
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 13 1.00
ACGTcount: A:0.32, C:0.08, G:0.44, T:0.16
Consensus pattern (12 bp):
GTAAGGTCGAGA
Left flanking sequence: Indices 93617 -- 94116
GGCCGAAGAGGCTAAATCGTAGCGGTAGGCCTCGATCGAAGAGGGGCGAAGCAGCGTCTATTTGC
TTCACCCCTCCCCCCCTCTCAGGGTACCGGGTAGCCGTGTGAATGAAGCGGCTTATGAGAAAGGG
AGAGCATGGGCCGTAGGCCGCGCCGGAGGAAGGCGGTAGCGCGGTTGCCGGGATTGATTAGAAGC
GTGGCGCCTACTCAAGCGCGGCTTTCATCTTGGGTTCTGTACTTGATGTTGAATTTTATTTATTA
ATTATTTATCGGCGCGTTCTAAGGTACGTAGTATGGGAGAGGCACGTAGCGGTCAAAATAATGCG
CGCTACGCTCCTTATTAGATTTAAAGGAGCGTAGCCTACCATACAAAGCTGAAATAATGCGCGCT
ACGCGCCTTTCCCACTTTAGACCGACCGCTACGCGGTCCTTAATATCGCTACGCGCCTCCGCTAC
CGCCTTCGGCGCGCCTACGGCCCTTCGGGTTGATTTAGCCTCCCC
Right flanking sequence: Indices 94142 -- 94641
CGCCTTCGGCGCCTAAGGTAGAGACTCGCTATCGCTACGCACCTATTCTTACCATACCCACGGAA
CTTGCAATAGTTTCATCAAAGAAGGGCCTACGGTATTTACCTTTAGGGCGGGACCCGAGTTCTCG
AAGATAAAAATATAATAGATACATAAAATATGACATTGTCATCAAATATACAAATGAAACTCGAA
GGAATGCCAAATACAGACGCTTGGTACAAGCGTAGGCGCCAGTAATACCCAGGAGGGATTAAATC
CGCATCCGCCTCGGTCAAGTCCCTAACAGGGCGGGCTCCGCCCTATAAGGACTAGGTCTGTATAG
GGCGGAGCAGATCGGTGCTTAAGCTGCACGAATTGCTGAGACGTCTAAATGCTTTCTTTGATAGC
TGGAAGTTCTTCAAAAGTATGAAATGCAGGAGGGCTTGGGACCATCCATTCAAGTGTCGTTGAAT
TCTGTTCAACAGCCCAAGGACTTGGAGCACACTTGTTTTCACTAG
Found at i:94676 original size:21 final size:22
Alignment explanation
Indices: 94651--94694 Score: 56
Period size: 21 Copynumber: 2.0 Consensus size: 22
94641 GTTAGAGTAA
94651 GAAAAA-CCACTAC-AAAGAAAC
1 GAAAAATCC-CTACTAAAGAAAC
*
94672 GAAAAATCCCTACTACAGAAAC
1 GAAAAATCCCTACTAAAGAAAC
94694 G
1 G
94695 TATGAGCCAA
Statistics
Matches: 20, Mismatches: 1, Indels: 3
0.83 0.04 0.12
Matches are distributed among these distances:
21 10 0.50
22 10 0.50
ACGTcount: A:0.55, C:0.25, G:0.11, T:0.09
Consensus pattern (22 bp):
GAAAAATCCCTACTAAAGAAAC
Left flanking sequence: Indices 94151 -- 94650
CGCCTAAGGTAGAGACTCGCTATCGCTACGCACCTATTCTTACCATACCCACGGAACTTGCAATA
GTTTCATCAAAGAAGGGCCTACGGTATTTACCTTTAGGGCGGGACCCGAGTTCTCGAAGATAAAA
ATATAATAGATACATAAAATATGACATTGTCATCAAATATACAAATGAAACTCGAAGGAATGCCA
AATACAGACGCTTGGTACAAGCGTAGGCGCCAGTAATACCCAGGAGGGATTAAATCCGCATCCGC
CTCGGTCAAGTCCCTAACAGGGCGGGCTCCGCCCTATAAGGACTAGGTCTGTATAGGGCGGAGCA
GATCGGTGCTTAAGCTGCACGAATTGCTGAGACGTCTAAATGCTTTCTTTGATAGCTGGAAGTTC
TTCAAAAGTATGAAATGCAGGAGGGCTTGGGACCATCCATTCAAGTGTCGTTGAATTCTGTTCAA
CAGCCCAAGGACTTGGAGCACACTTGTTTTCACTAGTTAGAGTAA
Right flanking sequence: Indices 94695 -- 95194
TATGAGCCAAAACTACTAAAGGCATTCCATCCAGCGTAAGCATCTGGATAATCAGGAATGCGACG
TGGCATACCTGCAAGCGGTTTTTTCCTTATTTATCAAATGTTAATGGATTGTGACTAAATATTTC
TCTTTTGTAAACTTCATCTGGAATTAGTCTTTCAGACGTTTCGGTGTGTTTAAATCCCAATGTTG
AATCAGTTCTTTTCTCGGTATCAAGAACTGGTTCATAAAGATCGAAATAGTACTGTTCCCGAGCC
AAATAATCCTTTTCAGTAATAGTACCTGTTGAACCACATGACTCAATAATAACTAAAATTGTCAT
GACCATATTTCCAAATGGAATTCTAAATATATCTGTTATCAGATAATTTAGAAGGGTGATAGTAT
TCAGCAAGTCTATCGCTTGATTTATAACCACCACCTACATATTGTTTCCCATTAACTAAATTATG
CCAAAGATAGATTCCAGTTTCCGTTGGATAATAAGAAACGATTTG
Found at i:94677 original size:22 final size:22
Alignment explanation
Indices: 94652--94694 Score: 52
Period size: 22 Copynumber: 2.0 Consensus size: 22
94642 TTAGAGTAAG
94652 AAAAACCACTAC-AAAGAAACGA
1 AAAAACC-CTACTAAAGAAACGA
* *
94674 AAAATCCCTACTACAGAAACG
1 AAAAACCCTACTAAAGAAACG
94695 TATGAGCCAA
Statistics
Matches: 18, Mismatches: 2, Indels: 2
0.82 0.09 0.09
Matches are distributed among these distances:
21 4 0.22
22 14 0.78
ACGTcount: A:0.56, C:0.26, G:0.09, T:0.09
Consensus pattern (22 bp):
AAAAACCCTACTAAAGAAACGA
Left flanking sequence: Indices 94152 -- 94651
GCCTAAGGTAGAGACTCGCTATCGCTACGCACCTATTCTTACCATACCCACGGAACTTGCAATAG
TTTCATCAAAGAAGGGCCTACGGTATTTACCTTTAGGGCGGGACCCGAGTTCTCGAAGATAAAAA
TATAATAGATACATAAAATATGACATTGTCATCAAATATACAAATGAAACTCGAAGGAATGCCAA
ATACAGACGCTTGGTACAAGCGTAGGCGCCAGTAATACCCAGGAGGGATTAAATCCGCATCCGCC
TCGGTCAAGTCCCTAACAGGGCGGGCTCCGCCCTATAAGGACTAGGTCTGTATAGGGCGGAGCAG
ATCGGTGCTTAAGCTGCACGAATTGCTGAGACGTCTAAATGCTTTCTTTGATAGCTGGAAGTTCT
TCAAAAGTATGAAATGCAGGAGGGCTTGGGACCATCCATTCAAGTGTCGTTGAATTCTGTTCAAC
AGCCCAAGGACTTGGAGCACACTTGTTTTCACTAGTTAGAGTAAG
Right flanking sequence: Indices 94695 -- 95194
TATGAGCCAAAACTACTAAAGGCATTCCATCCAGCGTAAGCATCTGGATAATCAGGAATGCGACG
TGGCATACCTGCAAGCGGTTTTTTCCTTATTTATCAAATGTTAATGGATTGTGACTAAATATTTC
TCTTTTGTAAACTTCATCTGGAATTAGTCTTTCAGACGTTTCGGTGTGTTTAAATCCCAATGTTG
AATCAGTTCTTTTCTCGGTATCAAGAACTGGTTCATAAAGATCGAAATAGTACTGTTCCCGAGCC
AAATAATCCTTTTCAGTAATAGTACCTGTTGAACCACATGACTCAATAATAACTAAAATTGTCAT
GACCATATTTCCAAATGGAATTCTAAATATATCTGTTATCAGATAATTTAGAAGGGTGATAGTAT
TCAGCAAGTCTATCGCTTGATTTATAACCACCACCTACATATTGTTTCCCATTAACTAAATTATG
CCAAAGATAGATTCCAGTTTCCGTTGGATAATAAGAAACGATTTG
Found at i:107530 original size:24 final size:24
Alignment explanation
Indices: 107493--107548 Score: 69
Period size: 24 Copynumber: 2.3 Consensus size: 24
107483 TCATCGCCCT
* *
107493 TTATTTATCTATGATGATTCATCA
1 TTATTTATCTATGATCAATCATCA
107517 TTATTTAT-TAATGATCAATCATCA
1 TTATTTATCT-ATGATCAATCATCA
*
107541 TGATTTAT
1 TTATTTAT
107549 GAGAATTTCT
Statistics
Matches: 28, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
23 1 0.04
24 27 0.96
ACGTcount: A:0.32, C:0.11, G:0.07, T:0.50
Consensus pattern (24 bp):
TTATTTATCTATGATCAATCATCA
Left flanking sequence: Indices 106993 -- 107492
ACAGCGAAGAAATAACACACTTGATTTTCGGTGAGCAATTATTATATGATGATACGTAAAGGGTG
ATATAGGAAATACCATAGTACGTAATACAAAAAATAATATAAAGCACGCATAACCGAACGAATTG
CGTCAAATAGGTAAAGTGATCGAGTTGAGGCTGAAGATGTAGGACGTTAGTTCTACATAACATTT
ATTTTCTACCTGCAAGAAAAATGGAAAGAATTGGAATATAAGCGACTTCTATAGAATTTTTGAAA
ATATGGGCTAAAGCCCCGCCGGGCGGTAGAGAAAATCAGAAAAGTTATAGCTAGAACCGGACCTC
GTGTTTTGCTCCCTTCTCGCGCATCTTTTTGTTTGTTTTCCCACCCGTTTTTGGCGGGAGTCGGA
TTCGGACCCACAACATTCAGATTATGAGCCTGACGAGTTACCAATTACTCTATCCCGCGAACAGC
CACCGAAAAAAGAGATATATTTTTGTTCTTTTTGTTCATCGCCCT
Right flanking sequence: Indices 107549 -- 108048
GAGAATTTCTTACTAATGAGGATTCATCATTATTTATCTACGATAATTCATCCAGATTTTCTATT
AGTGATTATACTAGATTCAAACCAGATTTGTCCAGGTTCGAAGGGAGGGAAAAAGGGGCGCGCCG
CAGCCCGCGCTAGCCCACTGGGTTGAAGTGACGGATACAATTTTGGTGTTTACCCAACTAAAGCG
ATTGGCTGGAGACGAAACCACGGTGGCTTCCCTCCCCGCGCACAGGCCATGAATTGGGGGTGTTA
TGGAGGAGGCACGTAGATTACCTTAGGCAACAACGCCGCAATCGGTAACATAGTGAAAAAGTACA
CAGGCACTACGTGCTTCTGGAAGATACTTCTTTTAGTTTTTGGCCGGAGCGATAATTTTATGGAA
TACGGGAAGCGAGAAGGATGCAGGAAAGTTTATAGAGGGGGTTGAGCTACTTTCAACCAACCGGA
GCTCCTCCTATATTACCTCGTCCGGAGGAGTCTGCGACCCCTAAA
Found at i:134633 original size:83 final size:83
Alignment explanation
Indices: 134497--134662 Score: 332
Period size: 83 Copynumber: 2.0 Consensus size: 83
134487 AAAAAAAAAT
134497 ATATATTTTTTTTATACCCAAGGCCTCGTATTGATGGGTAAATACTGCCCATGATGTATGACGTC
1 ATATATTTTTTTTATACCCAAGGCCTCGTATTGATGGGTAAATACTGCCCATGATGTATGACGTC
134562 AATCATGAAGAAGACAAA
66 AATCATGAAGAAGACAAA
134580 ATATATTTTTTTTATACCCAAGGCCTCGTATTGATGGGTAAATACTGCCCATGATGTATGACGTC
1 ATATATTTTTTTTATACCCAAGGCCTCGTATTGATGGGTAAATACTGCCCATGATGTATGACGTC
134645 AATCATGAAGAAGACAAA
66 AATCATGAAGAAGACAAA
134663 GTTTCCATGA
Statistics
Matches: 83, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
83 83 1.00
ACGTcount: A:0.34, C:0.17, G:0.18, T:0.31
Consensus pattern (83 bp):
ATATATTTTTTTTATACCCAAGGCCTCGTATTGATGGGTAAATACTGCCCATGATGTATGACGTC
AATCATGAAGAAGACAAA
Left flanking sequence: Indices 133997 -- 134496
GCCAATTTGGTACTGCAATACATATCTCTATGCTCATTCCAATCTTTTTAATCTTTGTTAGCTTT
TTTTTTTTAACCGGGATTTTGTTTATTTTAGAAACACGTCAAATAATTCCATCTTTTTATTTCCA
GCGAAAAAGCCAATGACTTTCCTGGAGCCTTGTCAAGAATTTTTCTTTCGTCAGTCTCTTCTTCT
CTCTCTACGTTGGACAGTACCTCCTGGTTCCGTCTGACAGTGCCCCCCGGGCTTTTTGTCATCAG
GAGCCAAAAGCCTATGGGAAGGAAAACGCGCGCAAGGCACGTAGTGCGGTAGGCCCACAATTTGG
TTGAAACATTTCAAGGGGGGCTATCCCCTATTGATTCGAGGGTTAAGGACCAGCAGGCCGTAGCA
GCTCAAGGGTAAATTTCTTTCATTGAAAAACATCGCCAAAGAATTCTTTTTATTCGTTACATGAA
CCCCGTCAATGCTGGCCAAAGTAGGCCTTAGGTATAAAAAAAAAT
Right flanking sequence: Indices 134663 -- 135162
GTTTCCATGATCCGTGAAAAAGCAACTGATAGAGTAGAGCTGCTCGCCAATTCTTCTTGCTGATT
CGTAGAAAAGGCGAGGCGCATATGGCTCTATGCTGGGCTCCCTATTCCCTCTATAGGGTTCATAG
AAGCTATTCTGTGAGAGTTTCAAGAGGCTAGCTCGCGACGTGTGTAATCTTCCGTTATTGAGGTT
GGGAGGACTCATAATCGGCATGCCAAATGCCGTAACGAACCCAGCTGTACGGCAAAAAAATATTT
TTTTGTTGCCAATCATAAGCAAAGTTTATAATGTTATGTCACCGGAATTGGGCCATTATTTTTTA
GTACTGAGTATTTCCGTTGCGTTAACTAACAAGCTGCGCCCCGTGGCTGTTTCACTCTATTTTTT
TTTGTTCACTATGTCTTTCTTTGGTATTTTGTTCTGCTATATTCCTTCCGACTTTTCCAATTACA
ACGTATTCACCAACTCAAATGCTAATGCCCCTTTGTTTTATAAAA
Done.