Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_034354
Parameters: 2 7 7 80 10 50 500
Length:  277718

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12800--12853
28
2.0
28
92
3
92
3
33
22
40
1.71
12801--12860
27
2.2
27
88
5
86
5
33
20
41
1.74
47461--47494
16
2.2
15
89
5
50
5
26
32
35
1.81
61283--61323
22
1.9
22
95
5
75
31
14
29
24
1.95
61623--61736
51
2.2
51
98
0
219
17
21
18
42
1.90
61809--61892
33
2.5
33
98
0
159
22
29
5
41
1.77
91198--91276
39
2.0
39
95
0
140
31
17
27
22
1.97
99324--99366
18
2.4
18
81
18
54
18
20
25
34
1.96
100978--101021
21
2.1
21
91
0
70
27
20
13
38
1.90
102598--102647
25
2.0
25
100
0
100
36
24
16
24
1.94
115060--115114
26
2.1
26
89
0
83
18
38
27
16
1.92
115560--115607
24
2.0
24
100
0
96
29
8
25
37
1.85
116008--116068
28
2.2
28
88
5
88
34
9
16
39
1.82
116633--116671
19
2.1
19
100
0
78
30
20
10
38
1.86
140517--140574
21
2.8
21
94
0
98
32
27
24
15
1.95
197649--197690
21
2.0
21
86
4
59
30
14
35
19
1.91
209895--209966
36
2.0
36
100
0
144
30
25
11
33
1.90
217014--217041
13
2.2
13
100
0
56
0
21
0
78
0.75
237960--238007
18
2.7
18
93
0
78
50
18
16
14
1.79
237976--238035
27
2.2
27
93
0
102
53
20
15
11
1.72
240012--240052
20
2.0
20
86
9
57
21
21
2
53
1.57

Tables:   1

The End!