Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NC_031212
Parameters: 2 7 7 80 10 50 500
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 500
Length: 104460
ACGTcount: A:0.30, C:0.20, G:0.21, T:0.29
Found at i:18998 original size:19 final size:20
Alignment explanation
Indices: 18956--18998 Score: 52
Period size: 19 Copynumber: 2.2 Consensus size: 20
18946 GGATGTTGGT
* *
18956 CATGACTTTCGAAAAGTTCC
1 CATGACTATCGAAAAGTTCA
*
18976 CATGACTAT-GAAAATTTCA
1 CATGACTATCGAAAAGTTCA
18995 CATG
1 CATG
18999 GAGGAGTTTG
Statistics
Matches: 20, Mismatches: 3, Indels: 1
0.83 0.12 0.04
Matches are distributed among these distances:
19 12 0.60
20 8 0.40
ACGTcount: A:0.35, C:0.21, G:0.14, T:0.30
Consensus pattern (20 bp):
CATGACTATCGAAAAGTTCA
Left flanking sequence: Indices 18456 -- 18955
GAGCTAAAAATGCATTTTTTTTCTTTTTTCTCTTTCTTTTTAATTTCTCCATTTTCAAATTTATG
GGAGACTTGTCATATTCAGAATCTTTCTGTGGTGTGCTTTGTTTTTCATTATCTTGTACCTTTCT
TTTATCATTTAAATATAGGCGCGATACGTGGGCAAACGAGGAGCGTGGGCTTGGAATGGAAGAGA
AGGGAAAACCGCGTAGGCGGGCACAGAGAAGAAAGCGCCAAGCGCTTTGTTGGCCTAGCGGAAAA
AAGAAACAAAGAAATAAAAAGAAAGAAAATTTTTCCTTTTTATTTCTTTCAAATAAATCAAAAAT
ATTTTTGATTTATTTGCTGCAATTTTCAAAAACCTTCGGCTTCAACGAAAAAGCCAAAATTTTGG
CTTTTTATTCTCTGCTTGCTTCTTCGCAAGCTTATTCTCTCGTCCTTGAAAATATTTGGAATAGA
TTTTTTATTGTTCGCGCCTCACCAAAAAGACTGATGGATGTTGGT
Right flanking sequence: Indices 18999 -- 19498
GAGGAGTTTGCATCTTTATTATGGGTGTTATTCTGTCGTGCGACCCGGCAGCTTATGCGCGACCA
TCTCGTGTTTAAGCTCACGCCATATGGGCGTGAACTCTGGTTGAATTCGGGTTCTAAATCCCGCC
GCTGAGATGCTCAGTCGACTCTTGAACCTTGATAGGAAGACGGCTTCTTCCCAAATTAGTGCAAA
AGGTTCAAGGACTTAGGATGAACTTAATGTGAATGGGTATAAGCTTCGCTGCTCAAAAACACCCA
GTATTGACCACACTGAGAGACTTGCCAATAGCAAAAAAGGCCGCGGGTGACGCTAGTTGGCGAAA
TGGCGTTAAGCATTCCTGGCAATACGGAAAGAGAGGTCGTGATGATATCATCTACGTTCGTACTG
TCCCTTGCGGAGTAAATCTCACATCCAAAAATCTAACCAGGGAACGGAATAATTCCCATTAAGTT
CCAGTAAAACTGGCAGGCCAGCCGGGCCGTAAGCTAGTGGGAACA
Found at i:30872 original size:13 final size:13
Alignment explanation
Indices: 30854--30879 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
30844 CGCGATTAAT
30854 CTTGCGGCCCAAA
1 CTTGCGGCCCAAA
30867 CTTGCGGCCCAAA
1 CTTGCGGCCCAAA
30880 AATGGAATTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.23, C:0.38, G:0.23, T:0.15
Consensus pattern (13 bp):
CTTGCGGCCCAAA
Left flanking sequence: Indices 30354 -- 30853
TTAGTTGACTCTGATTCTGACTCAAGGTGACAGGATTTGAACCTATGGCCCTCTGTACCCAAAAC
AGATGCGCTACCAGACTGCGCTACACCTTGGCTGATGTTCCCTAATGAATATTTGATAAATGCTT
AAATTGTTATTGAGCAACATACAAAAGGAACTAAAACTAATAAAAAAAATTCTATTTTTAACGCC
ACTGAAAAAAAGCACTACCATCTCGTTCAGTTTCTTTTTTGCTTGAAAATAGTTTTTTGGTGAAC
GTTTATGATCGTCTCAGCCCTTTAATGCTTGCTTGAGGCCAGAAGGGCGAGTCGGTCATTGTCCG
ACTTATTTACAAAGCTTTATAATGCAATTACATGTAATTGCATTATAAAGTCAAGTATTCAACAT
AATATATTATTAATCTTTTAGTTTCGTTATTAATTAAGTAATTCCATGGGAATAGCCATGAATAA
TCATAGATAGAGACGAAGGCCCAAATCCAAAATTGCGCGATTAAT
Right flanking sequence: Indices 30880 -- 31379
AATGGAATTATTATCAAGACTGAAAAGAATAAAAGCCACACAGAACCGAAATGAGGCTTTCCTAG
GTAATAGCTCTGACTCACTGTGAACGACTAGCAATGTCGGCAGAGCCTTAGAACAAAAAAAATGA
ATTTAGGAATTCGGATCGATAGCAACGAGGCGAAAAAATCCGCGGGGCTACCCTGCAACAAAGAC
CGTGCCGTGGTATTCCATAGAATATAGCATACTTAGAATCTGCAATCACTACGTAATTCCATGAT
GCGAAAGAAGCATAGCAAGTTTATTGGACCAAAGGTTCTACATAGTGAATGCATTTTGGTTTATG
GGTAGTAAACCTTAGTATGATGATGATTTAGTTAGTGATACGCAGAGGTTTTCTATTGGAAGTTT
GGCAGGTTCAGAACCTACTTCTGTGTAAAAAATCATACTCAAAAAAAAGAGTTTGATCCTGGCTC
AGAATGAACGCTAGCGATATGCTTAACACATGCAAGTTGAACGTT
Found at i:33119 original size:14 final size:14
Alignment explanation
Indices: 33100--33127 Score: 56
Period size: 14 Copynumber: 2.0 Consensus size: 14
33090 TCGGTTCTGT
33100 TTGATAGTAACACA
1 TTGATAGTAACACA
33114 TTGATAGTAACACA
1 TTGATAGTAACACA
33128 AAAAAGCAAA
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 14 1.00
ACGTcount: A:0.43, C:0.14, G:0.14, T:0.29
Consensus pattern (14 bp):
TTGATAGTAACACA
Left flanking sequence: Indices 32600 -- 33099
GAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAA
TGGCAATTACAATAGGAAGCGAGGCTTGAAGGCGGAGCGAATCCAGAAAGATAGCCTTAGTTCGG
ATTGTTCTCTGCAACTCGAGAACATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGCCGCG
GTGAATATGTACTCAGGCCCTGTACACACCGCCCGTCACACCATGGGAATTGGCTTCGCCCGAAG
CATCAAACCAAGGATCACCCATTCTTTCAGTGTTCTACGCCGTTGGTGAGTGTGGTCTACCAGAG
GAATTGGTGGTCTGATGTGGGATACCAAGGTGGGGCCTTTGACTGAGGTGAAGTCGTAACAAGGT
AGCCGTAGGGGAACCTGTGGCTGGATTGACTCCTTTTTTTCGACAAGAGAGAGAAAAAAAAAAGA
CTCCAAAAAAGAAACATCTATCTAGTTTCTGTCGTTCGGTTCTGT
Right flanking sequence: Indices 33128 -- 33627
AAAAAGCAAAAAAAAAGAGTAGATACGCCCTGTGCTCTTCATCCTCTGGACCAGGATTGCATGGC
CCGAAGCAGCATAATGCAATAGTAGCAAAGACTTGAGTGAATTTTTGGTCTATGTCAGTTAGTGA
GAGCCTACCCCGCAGCCTTTCCAATTATGCCTGTGAATGCCCCTACTATTACACAATAACGGCTT
CAGTCGCTATTATGAATATCACGTTGGCGCAGGGCGCTCTAATAATCTACTCCGTTTGAACTTCA
TACATAAACAGTTACTTCTATCGTTAAGCCCCATCGGGGCCAGGTCAAAGGGCGCATAAGGCGAA
TTATCATCCAACAGCCAGGGAAATGAGCGGCAGATTAGTAGAACAGCGGATTAATAATTCGCATG
TCGGAATAGTTTAGTCGGTTAGAACAGCGGGATCATAATTCGCACACGGGGGTTCAAATCCCTCT
TCCGATAGGAACTTTCGGATAAGAATTGAACCTACGGGTACGGGA
Found at i:33819 original size:22 final size:22
Alignment explanation
Indices: 33791--33834 Score: 79
Period size: 22 Copynumber: 2.0 Consensus size: 22
33781 TACATAGAGA
*
33791 CTCAAATTGTATAGATTTTAAC
1 CTCAAATTGCATAGATTTTAAC
33813 CTCAAATTGCATAGATTTTAAC
1 CTCAAATTGCATAGATTTTAAC
33835 GGCGGCATCA
Statistics
Matches: 21, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
22 21 1.00
ACGTcount: A:0.36, C:0.16, G:0.09, T:0.39
Consensus pattern (22 bp):
CTCAAATTGCATAGATTTTAAC
Left flanking sequence: Indices 33291 -- 33790
TGAATGCCCCTACTATTACACAATAACGGCTTCAGTCGCTATTATGAATATCACGTTGGCGCAGG
GCGCTCTAATAATCTACTCCGTTTGAACTTCATACATAAACAGTTACTTCTATCGTTAAGCCCCA
TCGGGGCCAGGTCAAAGGGCGCATAAGGCGAATTATCATCCAACAGCCAGGGAAATGAGCGGCAG
ATTAGTAGAACAGCGGATTAATAATTCGCATGTCGGAATAGTTTAGTCGGTTAGAACAGCGGGAT
CATAATTCGCACACGGGGGTTCAAATCCCTCTTCCGATAGGAACTTTCGGATAAGAATTGAACCT
ACGGGTACGGGAGGCAAAAAAAAGATATATATATCGTTTTTTTGATGGTCACTAACCTTATCCTA
AATCTCCTTCTTCTAGGATAGAACACGGTAAAGAAAGATTTACCATGGATAACTAGAAATGCAAC
ATAATCAATGAATCATCATAGATAATTCATTAAAATACATAGAGA
Right flanking sequence: Indices 33835 -- 34334
GGCGGCATCACCGGCGGCAATCTGATGTAGCCGACGCGTGGCCTGCGGCATCCATTATTTATGTG
GGGCTCTCCTTAAGGGGCGCTTCTCAGCTTGGTAAGAAATCGAAATAAAGTCAAGTTAGAGAGCC
CTGTGATTATTATCGCCGAAGAGCACCTGTGTATTCGGCTAAAGCCCTTGTTGACTCTATTCATC
AATCGCTACGCGCTTCCGGGCACTATGGTAAGACATGAAAACACCCGATCCCATTCCGACCTCGA
AATGTGAAATCGTCTTACGCTATATGTACTGATTTATCAATTTCGGGAGACATGGTCCAGGCCCG
GACAACGTCCAATTTCAATTATTCTAAAACGCTAAACAAAGTGATCAACAATCAATCGCGGGGCC
GAAGGTTCTAGGGGACTAAGCTCGGCAAATAGTACTATGCAACACTCGGCGCCCAAGGATCCATC
ATCATACAGACTCGCAACCAAAAAATCACATATTTCTAATAAAGA
Found at i:34612 original size:4 final size:4
Alignment explanation
Indices: 34603--34637 Score: 70
Period size: 4 Copynumber: 8.8 Consensus size: 4
34593 AAAAATATTG
34603 AAAT AAAT AAAT AAAT AAAT AAAT AAAT AAAT AAA
1 AAAT AAAT AAAT AAAT AAAT AAAT AAAT AAAT AAA
34638 GGTGTGATAA
Statistics
Matches: 31, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
4 31 1.00
ACGTcount: A:0.77, C:0.00, G:0.00, T:0.23
Consensus pattern (4 bp):
AAAT
Left flanking sequence: Indices 34103 -- 34602
ATCGTCTTACGCTATATGTACTGATTTATCAATTTCGGGAGACATGGTCCAGGCCCGGACAACGT
CCAATTTCAATTATTCTAAAACGCTAAACAAAGTGATCAACAATCAATCGCGGGGCCGAAGGTTC
TAGGGGACTAAGCTCGGCAAATAGTACTATGCAACACTCGGCGCCCAAGGATCCATCATCATACA
GACTCGCAACCAAAAAATCACATATTTCTAATAAAGAACTCTACTTGGGGCGGGCGGGGAACTGC
TGCGCAAAAAGAAATATTTTGCGGCGCCGTTGAAGAAAACCTTATTATGTGCGCGGGATAGAGTA
ATTGGTAACTCGTCAGGCTCATAATCTGAATGTTGTGTAGGTTCGAATCCTACTCCCGCCAAATA
GTCTAAGTGGTTTTTGTGGAACAGCGGGATTTATACAAAAAGCAGCAGTGCATCCATAACTTGGT
TATTTCTGCGCGTTCTTGATCTATTTTTCGGTCAGAAAAATATTG
Right flanking sequence: Indices 34638 -- 35137
GGTGTGATAAGACAAATACTCATTCTATTGTGTCTAGGCAAAAGGAACCCTGTATTCTGCTTGTG
ATGCGAATGATGCGATATGGAAATAAAAGATACGTATTCTATTGATGATCTGAAATAGTCATTTA
CGGGATAATGAAGGGGTGAATCGATCCAGTTATTTTAGTGGCCTGGATTTTCGTATGCCTCTTTT
TTCATCAGATGTTCTTTATTTTTTTCTTTTTTGAAAAAATATGCACAAAATGCATAAACCTTCGT
CGTCAAGCCTAAATGCACCCGCTCCAGTAAATGACCCGACTAGAAGGCAAGCCCGGCATTCTGAA
GTATGAATAGAAGTCTCATTGGCGAATATTCTGGTAATGACTGGTGAGGTAGGTGCAATTCCTAC
TTTATCCAAAATAATGCATCGGATGGATGCCTGGGCATTGAGAAAGAAGGACGCTTTCAAGGGCG
AAACGCCATGGGGAGATACCGTCTGTGATCCATGGATCTCCAATC
Found at i:41140 original size:17 final size:17
Alignment explanation
Indices: 41118--41181 Score: 82
Period size: 17 Copynumber: 4.0 Consensus size: 17
41108 AACCACTTAA
41118 TAACTAACACAAATAGT
1 TAACTAACACAAATAGT
41135 TAACTAACACAAATAGT
1 TAACTAACACAAATAGT
**
41152 TAACT---A-TTATAGT
1 TAACTAACACAAATAGT
41165 TAACTAACACAAATAGT
1 TAACTAACACAAATAGT
41182 AATGGATGAT
Statistics
Matches: 39, Mismatches: 4, Indels: 8
0.76 0.08 0.16
Matches are distributed among these distances:
13 10 0.26
14 1 0.03
16 1 0.03
17 27 0.69
ACGTcount: A:0.50, C:0.16, G:0.06, T:0.28
Consensus pattern (17 bp):
TAACTAACACAAATAGT
Left flanking sequence: Indices 40618 -- 41117
TGAAAAAAAATCTCCATATATTCTTTTATTTCATTGTAGTGGCTTGACAAGTCGACAATGGCGAC
AACTCAAAAATCTATTGTGTGCCTTTCGAGGTAGAACTTTATTTCGACCAAATTACAAAAGAAAA
CTACCACATAAAAACAAGCAAGGTGGTTTTATTGAGCAGCTTGCTTCTAGCGCAGGTCCCACTTG
TATCTTGTACTTAACTAAAGAAGCACCAGATAATACATGGTCACAGTTATTACCTTTGGCCTCAT
ACAACCAAAATCTAGTTTTATTATACGGACAACTTCAATCTACTTTAGTCAATCATATGGATATA
AAAAAAGCGGCTAATTTAGAAATAACATCAGTATTTCAACAACTTTTTGAGCTCATTTTTTACCC
ATATAATTCTTTATGTTCTTGTCTGAACAAGCCAATTTATGCTCTACCCACTATACAAGAAAAGA
CGCAAGAAGGGTTGCTTAGTCACCAGAAGATAACCAACCACTTAA
Right flanking sequence: Indices 41182 -- 41681
AATGGATGATTTGTTTTTTTGGCGAATAACGGGATTTGAACCCGTGTTTTCAAATTCACAATCTG
ACACTTTCACCTATTAAGTTATACTCGCCCTTCCAATTCAGACATTAAAATACTCGCTATCGGAT
TCGAACCGATAACCCATAGGAACAGATTTTGAGACTGCCGTGTTTACCATTTTCACCAAGCGAGT
ATGCTCACTATCGGACTTGAACCGATAACCCATAGGAACAGATTTTAAGTCTGTCGTGTTTACCA
TTTTCACCAAGTGAGCTTAGGCAGGCGAAGCGCAGAATCGAAACACAATAACACAATCTTTTTCT
TTAACACAATCCCCATCTTTCGTTTTCCTTTTGCCATTCCATCTTATAGACATCTCCGGCTTATC
CCGGCTCGGCTGAATCTGCGGTATCTTCTCAAATATTTGAAAAATCTATAGTCCTCTGTCTCAAG
GTGTGTAGAGACTCCTTTTTTATTGATTTATACTAATCTATCTTA
Found at i:41438 original size:81 final size:81
Alignment explanation
Indices: 41303--41452 Score: 257
Period size: 81 Copynumber: 1.9 Consensus size: 81
41293 AAAATACTCG
*
41303 CTATCGGATTCGAACCGATAACCCATAGGAACAGATTTTGAGACTGCCGTGTTTACCATTTTCAC
1 CTATCGGATTCGAACCGATAACCCATAGGAACAGATTTTAAGACTGCCGTGTTTACCATTTTCAC
41368 CAAGCGAGTATGCTCA
66 CAAGCGAGTATGCTCA
* *
41384 CTATCGGACTT-GAACCGATAACCCATAGGAACAGATTTTAAGTCTGTCGTGTTTACCATTTTCA
1 CTATCGGA-TTCGAACCGATAACCCATAGGAACAGATTTTAAGACTGCCGTGTTTACCATTTTCA
41448 CCAAG
65 CCAAG
41453 TGAGCTTAGG
Statistics
Matches: 65, Mismatches: 3, Indels: 2
0.93 0.04 0.03
Matches are distributed among these distances:
81 63 0.97
82 2 0.03
ACGTcount: A:0.29, C:0.24, G:0.19, T:0.29
Consensus pattern (81 bp):
CTATCGGATTCGAACCGATAACCCATAGGAACAGATTTTAAGACTGCCGTGTTTACCATTTTCAC
CAAGCGAGTATGCTCA
Left flanking sequence: Indices 40803 -- 41302
GTCCCACTTGTATCTTGTACTTAACTAAAGAAGCACCAGATAATACATGGTCACAGTTATTACCT
TTGGCCTCATACAACCAAAATCTAGTTTTATTATACGGACAACTTCAATCTACTTTAGTCAATCA
TATGGATATAAAAAAAGCGGCTAATTTAGAAATAACATCAGTATTTCAACAACTTTTTGAGCTCA
TTTTTTACCCATATAATTCTTTATGTTCTTGTCTGAACAAGCCAATTTATGCTCTACCCACTATA
CAAGAAAAGACGCAAGAAGGGTTGCTTAGTCACCAGAAGATAACCAACCACTTAATAACTAACAC
AAATAGTTAACTAACACAAATAGTTAACTATTATAGTTAACTAACACAAATAGTAATGGATGATT
TGTTTTTTTGGCGAATAACGGGATTTGAACCCGTGTTTTCAAATTCACAATCTGACACTTTCACC
TATTAAGTTATACTCGCCCTTCCAATTCAGACATTAAAATACTCG
Right flanking sequence: Indices 41453 -- 41952
TGAGCTTAGGCAGGCGAAGCGCAGAATCGAAACACAATAACACAATCTTTTTCTTTAACACAATC
CCCATCTTTCGTTTTCCTTTTGCCATTCCATCTTATAGACATCTCCGGCTTATCCCGGCTCGGCT
GAATCTGCGGTATCTTCTCAAATATTTGAAAAATCTATAGTCCTCTGTCTCAAGGTGTGTAGAGA
CTCCTTTTTTATTGATTTATACTAATCTATCTTAGATCCGAGATAGTGCCGAAAAAATGATTCAA
TTTAATCTAACCATGGTTGCCTCGGCAATGGCAATGACTTTTATACAATATGCAGAATACTCCAA
AACCTCTATTTAGAACTGAAAGAAGATAATGCTTTTTTATGAGAAAATCATAAAGTGCAAAGGTT
AAAATTTTGAGCTTTGTTTTACGTAGTTTCGCCATCTATATAATAGGATATGGTAGAAAATAATA
AGTTGGCGAGGAAGTAAAAATATATATATATCTATATATATATAT
Found at i:49316 original size:22 final size:22
Alignment explanation
Indices: 49285--49328 Score: 70
Period size: 22 Copynumber: 2.0 Consensus size: 22
49275 TCTCCTCGAC
49285 CGTGACTGAGACCGTCCAGTCA
1 CGTGACTGAGACCGTCCAGTCA
* *
49307 CGTGATTGAGGCCGTCCAGTCA
1 CGTGACTGAGACCGTCCAGTCA
49329 TAATAGCAAG
Statistics
Matches: 20, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
22 20 1.00
ACGTcount: A:0.20, C:0.30, G:0.30, T:0.20
Consensus pattern (22 bp):
CGTGACTGAGACCGTCCAGTCA
Left flanking sequence: Indices 48785 -- 49284
TAATGTTGATCGGCTTAACCATATTTATTACCATAATAGGTCCGTGGGATTTTATTTCTTTCTGG
GTAGATAATCGATTGTATTTTATTTACATAGTGAGTTTTCTATTTATTCATTTTGAAAACGACAT
TAGCACGAACTAAAGGGGCATACTTCCTTATATAATACCATGAAACTTTGAGGGACGCAATGATA
AGCCAGTGCTACGCCCTTTTTTTGGCCCCGCCGAGAGGGAGGGCTGAGGCCCAACGAAGCCTAAC
AAGCAAAAAAAATAGATTTTTTGGAGCCTAAGCTATGCTCTGCGGTCTAGCTATGATAAACCGTA
GAAAGAAAATGGATCCTCGAATAAAGCACGTTATTGCTTTGGGTCTATGGGGAATCTGAAGAAGA
AGAAGAAGAAAGTAAAGGTTGGAATGATAGAATAATGAATCGAAAGAGAGGAAATGAAAAAAACC
ATAAAACGAAAAAAAAAAATTTCGGCTTTTTTTATTCTCCTCGAC
Right flanking sequence: Indices 49329 -- 49828
TAATAGCAAGCCCTAGAGCATTGAACAAAGCGGTGAAAGGCGAAGCATGCAATTACATAGTATGC
GCGTATAAAAGCTCATCAAGTTATGCAATTATTGCGGGCTTTATGTATATAAGTGCAGGGGGTTA
TGATGATATACCCATAAGGCCTCTATGGCTGGAGAGCCGGGAGGAAATATGGACCCGCGGCCTGC
GAAGAAAGCTGCGTCCCCGGGATCTTCTGGAAAAAGAGTAAACATTTATGTTACAATTTTTAGCT
CCATTTTATTCCAATCTCAGTGGTCTCATTCTGTGTCCTTTATTAGGAAGCATCATTCTTTTCGT
TATCCCCGATCCCAGAATACGACTGATACGAAGTATTGGTTTGTGCACCTCTTTGATTACTTTCT
TATATTCCCTTCTTTTCTGGATACAATTTGATAATTCTACAGCCAAATTTCAATTCGTGGAAACC
ATTCGATGGCTTCCTTATTCAAACATCAATTTTTATATAGGTATA
Found at i:72038 original size:24 final size:24
Alignment explanation
Indices: 72010--72055 Score: 92
Period size: 24 Copynumber: 1.9 Consensus size: 24
72000 GCGGCATGGC
72010 TGGCATGTGGCCGCGAATGCGGCA
1 TGGCATGTGGCCGCGAATGCGGCA
72034 TGGCATGTGGCCGCGAATGCGG
1 TGGCATGTGGCCGCGAATGCGG
72056 GGCAGGCGGC
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
24 22 1.00
ACGTcount: A:0.15, C:0.24, G:0.43, T:0.17
Consensus pattern (24 bp):
TGGCATGTGGCCGCGAATGCGGCA
Left flanking sequence: Indices 71510 -- 72009
TGGGGCATATCCTGGTGCCCAATCTCCAGTCCGCGTCAATGGAGTCAATCGCCCAGAGGTAGCGT
TGCCGCAATGCGCGTGGAAAAGCATCTGGGAAACCAAGTCATGACCCATAAAAGGACGACTTGGA
AGATACTGTTGGGATTGATGAGGCTGACGAATCCGAATGACGTAGCTGCTGAACGACAGCATTCA
CCAAGCCAGCGGGGAACGACTTGGTCCTGGAATCGGTTCTTTTGGTAGGTATAACGGGGGCCGGA
GACGGAAAACAAGGGCGAAGCAGGGGCATTCTCAGTAAGGGAATAAGACTATGCGGACATCTTAC
CTCGACGAACAGGTAGAAAAAGTCGAAAACGCAATCACGGGATCGACCTACTCTCTAGCGAGAGG
GTCGGCGGAGCCGCTATAGTAAGTCAATAGGGAAATCGACCGAGCCAGGTACTGAAGGGCGGCAG
TCATGATCCGAGGGTAGAGGGCCACTTCAGTGGCAGCGGCATGGC
Right flanking sequence: Indices 72056 -- 72555
GGCAGGCGGCGACGCTTCAACTCTTCTGAGAAGACGGGTTGGTCCCAGCAGACATAAGAATGCTG
CTACGATCTCATTCAAGAAATACCTCGTAAAGCGCGTCAATCTAGATCTAGATTGTTGTTGATGT
GCTTGAAGAAATCAGTGGCGGAGAGCTTTATGACGGGAAACTGTCACGTAAGGTTCGGAGGGCGG
GGAAATCTCCGACCCCTACTTTTGATTATGGTATGGTATTGTCAGATTTAAATGTAGGTATACTT
TATCTATTTGCTATATCTTCTCTAGGCGTGTATGGTATTATTACAGCAGGCTGGTCCAGTAATTC
TAAATATGCTTTTCTAGGAGCATTACGATCTGCAGCTCAAATGGTTTCTTATGAAGTTTCTATCG
GTCTTATTATCATTACCGTACTGATTTGTGTAGGTTCTTGTAACTTCAGTGAGATTGTAATCGCG
CAAAAGCAGATATGGTTTGCTGCGCCCTTGTTTCCTGTATTCATT
Found at i:83965 original size:7 final size:7
Alignment explanation
Indices: 83953--83995 Score: 77
Period size: 7 Copynumber: 6.0 Consensus size: 7
83943 TACTATTAGT
83953 AGGAAAA
1 AGGAAAA
83960 AGGAAAA
1 AGGAAAA
83967 GAGGAAAA
1 -AGGAAAA
83975 AGGAAAA
1 AGGAAAA
83982 AGGAAAA
1 AGGAAAA
83989 AGGAAAA
1 AGGAAAA
83996 GGGCTTTACG
Statistics
Matches: 35, Mismatches: 0, Indels: 2
0.95 0.00 0.05
Matches are distributed among these distances:
7 28 0.80
8 7 0.20
ACGTcount: A:0.70, C:0.00, G:0.30, T:0.00
Consensus pattern (7 bp):
AGGAAAA
Left flanking sequence: Indices 83453 -- 83952
AGCCCAATTCCTATTGAAAAACAAATAGTTGTTATTTATGCAGCTGTCAAAGGTTATTTAGATCA
AATTCCTATTTCGAGCATCAATCAATATGAACATGAGCTTTTGAAGTCTATAGACTCAGATATAC
TTTCTGCTATCGTACAACAAAAAAACATTACTGAGCAGATTGATAGTCAACTGGCTACCTTTTGT
CAAAAATTTACACAGAGCTTCTTAGCAACTCATTCAGTTTAAAAAAATGAAACTAAAAAAAAATT
TTCAGGCCGCAGGTTTTGTTTCCGTGCTTCTGGGTGGAGGGTGAAAGCGGCCAGGGCGCAGCCAA
TTTTTTTTCTTCCGCCCTCTGGCTACGCTCTTAGTAGGGCTTCGTCATACGAGCGGAGCTCGAAA
ACCCTCCATCCCCACATTAACAACATGTAGATTCGAAGAAAACAAAAACGCAACAAGACATTAAC
AAAATTGAATATATAGAACGCTTCTTCTTCTAATGTACTATTAGT
Right flanking sequence: Indices 83996 -- 84495
GGGCTTTACGCCTTTGTATTTGTACCTTTACGCCTTTGTATTTGTACCATCGATATTATCTACGT
ATGCGTCATCTTTGCCCACTATTTGGTTTTTAACTGGATGACCCAGATTAACTATGTATTGCCGT
AATGCTGCGCTTTGCGCCCACTATATTTATATTTATATTGCTGGGCCCGCGCCTAGATAGATGTT
TGCATCAGTCTTTTCTTTCTTCTAAAATGAATCAATCATTTTCCTTTTGCATCAGTCTTTTCTTT
CTTCTAAAATGAATCAATCATTTTCGATGATTGAATGAATCAATCATTTTCGATGATTGCTTCGC
CCTTCACCAAATTCTAGCTGGTGTAATATTCTAGCTGGTGTAATATTCTAGCTGGTGTAATATTC
TAGCTGGTGTAATATTCTAGCTGGTGTAATCAGGAGAAAAGGGATTCGAACCCTTAACCTGTGGT
TTTGGAGACCATTGTTCTACCATTGGAACTATTCTCCTAGAAAAA
Found at i:84027 original size:22 final size:22
Alignment explanation
Indices: 83999--84043 Score: 90
Period size: 22 Copynumber: 2.0 Consensus size: 22
83989 AGGAAAAGGG
83999 CTTTACGCCTTTGTATTTGTAC
1 CTTTACGCCTTTGTATTTGTAC
84021 CTTTACGCCTTTGTATTTGTAC
1 CTTTACGCCTTTGTATTTGTAC
84043 C
1 C
84044 ATCGATATTA
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
22 23 1.00
ACGTcount: A:0.13, C:0.24, G:0.13, T:0.49
Consensus pattern (22 bp):
CTTTACGCCTTTGTATTTGTAC
Left flanking sequence: Indices 83499 -- 83998
TCAAAGGTTATTTAGATCAAATTCCTATTTCGAGCATCAATCAATATGAACATGAGCTTTTGAAG
TCTATAGACTCAGATATACTTTCTGCTATCGTACAACAAAAAAACATTACTGAGCAGATTGATAG
TCAACTGGCTACCTTTTGTCAAAAATTTACACAGAGCTTCTTAGCAACTCATTCAGTTTAAAAAA
ATGAAACTAAAAAAAAATTTTCAGGCCGCAGGTTTTGTTTCCGTGCTTCTGGGTGGAGGGTGAAA
GCGGCCAGGGCGCAGCCAATTTTTTTTCTTCCGCCCTCTGGCTACGCTCTTAGTAGGGCTTCGTC
ATACGAGCGGAGCTCGAAAACCCTCCATCCCCACATTAACAACATGTAGATTCGAAGAAAACAAA
AACGCAACAAGACATTAACAAAATTGAATATATAGAACGCTTCTTCTTCTAATGTACTATTAGTA
GGAAAAAGGAAAAGAGGAAAAAGGAAAAAGGAAAAAGGAAAAGGG
Right flanking sequence: Indices 84044 -- 84543
ATCGATATTATCTACGTATGCGTCATCTTTGCCCACTATTTGGTTTTTAACTGGATGACCCAGAT
TAACTATGTATTGCCGTAATGCTGCGCTTTGCGCCCACTATATTTATATTTATATTGCTGGGCCC
GCGCCTAGATAGATGTTTGCATCAGTCTTTTCTTTCTTCTAAAATGAATCAATCATTTTCCTTTT
GCATCAGTCTTTTCTTTCTTCTAAAATGAATCAATCATTTTCGATGATTGAATGAATCAATCATT
TTCGATGATTGCTTCGCCCTTCACCAAATTCTAGCTGGTGTAATATTCTAGCTGGTGTAATATTC
TAGCTGGTGTAATATTCTAGCTGGTGTAATATTCTAGCTGGTGTAATCAGGAGAAAAGGGATTCG
AACCCTTAACCTGTGGTTTTGGAGACCATTGTTCTACCATTGGAACTATTCTCCTAGAAAAAAAA
GTGGTTCTTGGTTTATGGAATTTGCACCTATTTGTGTCTATCTAG
Found at i:84258 original size:47 final size:47
Alignment explanation
Indices: 84189--84280 Score: 184
Period size: 47 Copynumber: 2.0 Consensus size: 47
84179 TAGATAGATG
84189 TTTGCATCAGTCTTTTCTTTCTTCTAAAATGAATCAATCATTTTCCT
1 TTTGCATCAGTCTTTTCTTTCTTCTAAAATGAATCAATCATTTTCCT
84236 TTTGCATCAGTCTTTTCTTTCTTCTAAAATGAATCAATCATTTTC
1 TTTGCATCAGTCTTTTCTTTCTTCTAAAATGAATCAATCATTTTC
84281 GATGATTGAA
Statistics
Matches: 45, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
47 45 1.00
ACGTcount: A:0.24, C:0.21, G:0.07, T:0.49
Consensus pattern (47 bp):
TTTGCATCAGTCTTTTCTTTCTTCTAAAATGAATCAATCATTTTCCT
Left flanking sequence: Indices 83689 -- 84188
AAAAAATGAAACTAAAAAAAAATTTTCAGGCCGCAGGTTTTGTTTCCGTGCTTCTGGGTGGAGGG
TGAAAGCGGCCAGGGCGCAGCCAATTTTTTTTCTTCCGCCCTCTGGCTACGCTCTTAGTAGGGCT
TCGTCATACGAGCGGAGCTCGAAAACCCTCCATCCCCACATTAACAACATGTAGATTCGAAGAAA
ACAAAAACGCAACAAGACATTAACAAAATTGAATATATAGAACGCTTCTTCTTCTAATGTACTAT
TAGTAGGAAAAAGGAAAAGAGGAAAAAGGAAAAAGGAAAAAGGAAAAGGGCTTTACGCCTTTGTA
TTTGTACCTTTACGCCTTTGTATTTGTACCATCGATATTATCTACGTATGCGTCATCTTTGCCCA
CTATTTGGTTTTTAACTGGATGACCCAGATTAACTATGTATTGCCGTAATGCTGCGCTTTGCGCC
CACTATATTTATATTTATATTGCTGGGCCCGCGCCTAGATAGATG
Right flanking sequence: Indices 84281 -- 84780
GATGATTGAATGAATCAATCATTTTCGATGATTGCTTCGCCCTTCACCAAATTCTAGCTGGTGTA
ATATTCTAGCTGGTGTAATATTCTAGCTGGTGTAATATTCTAGCTGGTGTAATATTCTAGCTGGT
GTAATCAGGAGAAAAGGGATTCGAACCCTTAACCTGTGGTTTTGGAGACCATTGTTCTACCATTG
GAACTATTCTCCTAGAAAAAAAAGTGGTTCTTGGTTTATGGAATTTGCACCTATTTGTGTCTATC
TAGTAATAAGTTTGCTATTTTCTTTGATCTTAATCGGTGTTTCCTTTCTATTTGCTTCTTCCTCT
AATTCGGCTTATCCGGAGAAATTGTCAGCTTACGAATGCGGTTTTGATCCTTTCGATGATGCCAG
AAGTCGTTTCGATATACGATTTTATCTTGTTTCTATTCTATTCATTATATTCGATCTGGAAGTCA
CCTTTTTATTTCCTTGGGCAGTTTCTCTTAACAAAATTGGTTTGT
Found at i:84293 original size:26 final size:26
Alignment explanation
Indices: 84263--84314 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
84253 TTTCTTCTAA
84263 AATGAATCAATCATTTTCGATGATTG
1 AATGAATCAATCATTTTCGATGATTG
84289 AATGAATCAATCATTTTCGATGATTG
1 AATGAATCAATCATTTTCGATGATTG
84315 CTTCGCCCTT
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.35, C:0.12, G:0.15, T:0.38
Consensus pattern (26 bp):
AATGAATCAATCATTTTCGATGATTG
Left flanking sequence: Indices 83763 -- 84262
CCAGGGCGCAGCCAATTTTTTTTCTTCCGCCCTCTGGCTACGCTCTTAGTAGGGCTTCGTCATAC
GAGCGGAGCTCGAAAACCCTCCATCCCCACATTAACAACATGTAGATTCGAAGAAAACAAAAACG
CAACAAGACATTAACAAAATTGAATATATAGAACGCTTCTTCTTCTAATGTACTATTAGTAGGAA
AAAGGAAAAGAGGAAAAAGGAAAAAGGAAAAAGGAAAAGGGCTTTACGCCTTTGTATTTGTACCT
TTACGCCTTTGTATTTGTACCATCGATATTATCTACGTATGCGTCATCTTTGCCCACTATTTGGT
TTTTAACTGGATGACCCAGATTAACTATGTATTGCCGTAATGCTGCGCTTTGCGCCCACTATATT
TATATTTATATTGCTGGGCCCGCGCCTAGATAGATGTTTGCATCAGTCTTTTCTTTCTTCTAAAA
TGAATCAATCATTTTCCTTTTGCATCAGTCTTTTCTTTCTTCTAA
Right flanking sequence: Indices 84315 -- 84814
CTTCGCCCTTCACCAAATTCTAGCTGGTGTAATATTCTAGCTGGTGTAATATTCTAGCTGGTGTA
ATATTCTAGCTGGTGTAATATTCTAGCTGGTGTAATCAGGAGAAAAGGGATTCGAACCCTTAACC
TGTGGTTTTGGAGACCATTGTTCTACCATTGGAACTATTCTCCTAGAAAAAAAAGTGGTTCTTGG
TTTATGGAATTTGCACCTATTTGTGTCTATCTAGTAATAAGTTTGCTATTTTCTTTGATCTTAAT
CGGTGTTTCCTTTCTATTTGCTTCTTCCTCTAATTCGGCTTATCCGGAGAAATTGTCAGCTTACG
AATGCGGTTTTGATCCTTTCGATGATGCCAGAAGTCGTTTCGATATACGATTTTATCTTGTTTCT
ATTCTATTCATTATATTCGATCTGGAAGTCACCTTTTTATTTCCTTGGGCAGTTTCTCTTAACAA
AATTGGTTTGTTTGGATTTTGGTCTATGATAGTATTTTTATCGAT
Found at i:84353 original size:17 final size:17
Alignment explanation
Indices: 84331--84415 Score: 170
Period size: 17 Copynumber: 5.0 Consensus size: 17
84321 CCTTCACCAA
84331 ATTCTAGCTGGTGTAAT
1 ATTCTAGCTGGTGTAAT
84348 ATTCTAGCTGGTGTAAT
1 ATTCTAGCTGGTGTAAT
84365 ATTCTAGCTGGTGTAAT
1 ATTCTAGCTGGTGTAAT
84382 ATTCTAGCTGGTGTAAT
1 ATTCTAGCTGGTGTAAT
84399 ATTCTAGCTGGTGTAAT
1 ATTCTAGCTGGTGTAAT
84416 CAGGAGAAAA
Statistics
Matches: 68, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
17 68 1.00
ACGTcount: A:0.24, C:0.12, G:0.24, T:0.41
Consensus pattern (17 bp):
ATTCTAGCTGGTGTAAT
Left flanking sequence: Indices 83831 -- 84330
CGGAGCTCGAAAACCCTCCATCCCCACATTAACAACATGTAGATTCGAAGAAAACAAAAACGCAA
CAAGACATTAACAAAATTGAATATATAGAACGCTTCTTCTTCTAATGTACTATTAGTAGGAAAAA
GGAAAAGAGGAAAAAGGAAAAAGGAAAAAGGAAAAGGGCTTTACGCCTTTGTATTTGTACCTTTA
CGCCTTTGTATTTGTACCATCGATATTATCTACGTATGCGTCATCTTTGCCCACTATTTGGTTTT
TAACTGGATGACCCAGATTAACTATGTATTGCCGTAATGCTGCGCTTTGCGCCCACTATATTTAT
ATTTATATTGCTGGGCCCGCGCCTAGATAGATGTTTGCATCAGTCTTTTCTTTCTTCTAAAATGA
ATCAATCATTTTCCTTTTGCATCAGTCTTTTCTTTCTTCTAAAATGAATCAATCATTTTCGATGA
TTGAATGAATCAATCATTTTCGATGATTGCTTCGCCCTTCACCAA
Right flanking sequence: Indices 84416 -- 84915
CAGGAGAAAAGGGATTCGAACCCTTAACCTGTGGTTTTGGAGACCATTGTTCTACCATTGGAACT
ATTCTCCTAGAAAAAAAAGTGGTTCTTGGTTTATGGAATTTGCACCTATTTGTGTCTATCTAGTA
ATAAGTTTGCTATTTTCTTTGATCTTAATCGGTGTTTCCTTTCTATTTGCTTCTTCCTCTAATTC
GGCTTATCCGGAGAAATTGTCAGCTTACGAATGCGGTTTTGATCCTTTCGATGATGCCAGAAGTC
GTTTCGATATACGATTTTATCTTGTTTCTATTCTATTCATTATATTCGATCTGGAAGTCACCTTT
TTATTTCCTTGGGCAGTTTCTCTTAACAAAATTGGTTTGTTTGGATTTTGGTCTATGATAGTATT
TTTATCGATTTCGACGATTGGATTTTTATACGAATGGAAAAAGGGCGCTTTAGATTGGGAGTAAC
CCGGCAATTTCCGAGCTTGCAAAACGATAAAAGCAAAAAAACTGT
Found at i:86758 original size:21 final size:21
Alignment explanation
Indices: 86732--86779 Score: 62
Period size: 21 Copynumber: 2.3 Consensus size: 21
86722 TTTTATTGAA
86732 ATATAACCA-AAAAAGCATGCG
1 ATATAA-CATAAAAAGCATGCG
* *
86753 ATATAATATGAAAAGCATGCG
1 ATATAACATAAAAAGCATGCG
86774 ATATAA
1 ATATAA
86780 TATGATTCAA
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
20 1 0.04
21 23 0.96
ACGTcount: A:0.52, C:0.12, G:0.15, T:0.21
Consensus pattern (21 bp):
ATATAACATAAAAAGCATGCG
Left flanking sequence: Indices 86232 -- 86731
AAAAAAAATATATATATTTTTTTTTACTGTGGACATTTAAATAAAAGGTGCCCTGGTTCCATACG
GCTCCACTAGCATAGCGAGTAGAGGCCGAAGCGCTTCGGCCTTATTGGCCATTACTGTGTAATCG
GCTTGACGCATGCGAGGCCACAGGTCAACTAATCGCGAAAAAGTGCCTTTCAGTGCAAAGCAGAG
AGCCGCGCAGCCATTAGACTCGTGGCTTCGCTTGAACGATACTTCCGGGTTTCTACTAACGTATA
TAGCCAGTAGAATGGAAAGATTCCGATGAATCATCGTAGATGATTCATTATGTTTGGGAAAATAG
CTTAGTTGGTTAGAGTGCTGGTCTGTCACGCCAGAAGTCGCGGGTTCAAATCCCGTTTTTCCCGG
TAATTTCTTAATTCAAAAATGAATTATTATAAAATCAGTTCATAAAGAGAGATATATCTCTCTTT
ATGAACTGGTAACTGAATCAGTTAAAATCTTTTTTTTTTATTGAA
Right flanking sequence: Indices 86780 -- 87279
TATGATTCAATTTTACAGGGCGTAGCCCTTATCCTACCCGCGTCAAAAGTAATCTCGAGGTGTGA
AACTTTAGGGATAATGTAATAATGGTTAAGATTACATACGGAGCTGATGCTAGAGTAAAGAGATT
GGAAAAAAAAATTATGCTATGCGGATGAATAGTGCAAGGAACTAATACAAAGACCTTGTCAAAAA
GACTCTAAGATCTTAATCGGTGTTAGCGGAACTGAAAAATTTTCTATATAGAATTTTATATAGAG
AATATCCTAGGTTAAGGTAAGGAGTAGATTGGCGCCCCGAGTTGTTCGATTATAGCGGGAAGCCG
GCGGTGAAAAGGGCGAAGCTCTCTTATGATGAGATAGAAAGATTTACTGCGCCTTATTTGCTCCG
CCCTTAATGGCGCCATTTAATATAGCAGTTCCCATTGAAGGAAGGATATCTGATAATGAGAATGA
GATACCCTGGCAAAGCAAGTAAGCATAAGCTTGGAAGAGTGTCGA
Found at i:86780 original size:21 final size:21
Alignment explanation
Indices: 86742--86784 Score: 86
Period size: 21 Copynumber: 2.0 Consensus size: 21
86732 ATATAACCAA
86742 AAAAGCATGCGATATAATATG
1 AAAAGCATGCGATATAATATG
86763 AAAAGCATGCGATATAATATG
1 AAAAGCATGCGATATAATATG
86784 A
1 A
86785 TTCAATTTTA
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 22 1.00
ACGTcount: A:0.49, C:0.09, G:0.19, T:0.23
Consensus pattern (21 bp):
AAAAGCATGCGATATAATATG
Left flanking sequence: Indices 86242 -- 86741
TATATATTTTTTTTTACTGTGGACATTTAAATAAAAGGTGCCCTGGTTCCATACGGCTCCACTAG
CATAGCGAGTAGAGGCCGAAGCGCTTCGGCCTTATTGGCCATTACTGTGTAATCGGCTTGACGCA
TGCGAGGCCACAGGTCAACTAATCGCGAAAAAGTGCCTTTCAGTGCAAAGCAGAGAGCCGCGCAG
CCATTAGACTCGTGGCTTCGCTTGAACGATACTTCCGGGTTTCTACTAACGTATATAGCCAGTAG
AATGGAAAGATTCCGATGAATCATCGTAGATGATTCATTATGTTTGGGAAAATAGCTTAGTTGGT
TAGAGTGCTGGTCTGTCACGCCAGAAGTCGCGGGTTCAAATCCCGTTTTTCCCGGTAATTTCTTA
ATTCAAAAATGAATTATTATAAAATCAGTTCATAAAGAGAGATATATCTCTCTTTATGAACTGGT
AACTGAATCAGTTAAAATCTTTTTTTTTTATTGAAATATAACCAA
Right flanking sequence: Indices 86785 -- 87284
TTCAATTTTACAGGGCGTAGCCCTTATCCTACCCGCGTCAAAAGTAATCTCGAGGTGTGAAACTT
TAGGGATAATGTAATAATGGTTAAGATTACATACGGAGCTGATGCTAGAGTAAAGAGATTGGAAA
AAAAAATTATGCTATGCGGATGAATAGTGCAAGGAACTAATACAAAGACCTTGTCAAAAAGACTC
TAAGATCTTAATCGGTGTTAGCGGAACTGAAAAATTTTCTATATAGAATTTTATATAGAGAATAT
CCTAGGTTAAGGTAAGGAGTAGATTGGCGCCCCGAGTTGTTCGATTATAGCGGGAAGCCGGCGGT
GAAAAGGGCGAAGCTCTCTTATGATGAGATAGAAAGATTTACTGCGCCTTATTTGCTCCGCCCTT
AATGGCGCCATTTAATATAGCAGTTCCCATTGAAGGAAGGATATCTGATAATGAGAATGAGATAC
CCTGGCAAAGCAAGTAAGCATAAGCTTGGAAGAGTGTCGAATAGA
Done.