Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_017855
Parameters: 2 7 7 80 10 50 500
Length:  281132

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3267--3304
18
2.1
18
85
9
51
73
2
10
13
1.19
24523--24617
42
2.3
42
96
3
174
31
21
10
36
1.87
43174--43335
71
2.3
71
100
0
324
31
18
15
34
1.92
65187--65259
36
1.9
37
91
8
121
30
15
26
28
1.96
75323--75362
12
3.3
12
85
0
53
35
0
55
10
1.34
79117--79182
22
3.0
22
100
0
132
13
27
4
54
1.58
96859--97020
71
2.3
71
100
0
324
31
18
15
34
1.92
104442--104517
27
2.8
27
97
0
143
17
22
32
27
1.96
113373--113408
18
2.0
18
100
0
72
33
27
5
33
1.80
114549--114604
21
2.5
23
88
8
80
21
32
26
19
1.97
114644--114705
21
2.8
22
85
9
90
19
37
24
19
1.94
162198--162289
36
2.6
36
92
3
132
30
22
14
32
1.93
165768--165795
6
4.7
6
100
0
56
17
32
0
50
1.47
208917--208952
18
2.0
18
100
0
72
33
27
5
33
1.80
210093--210148
21
2.5
23
88
8
80
21
32
26
19
1.97
210188--210249
21
2.8
22
85
9
90
19
37
24
19
1.94
221630--221655
13
2.0
13
100
0
52
23
7
53
15
1.67
256299--256334
18
2.0
18
100
0
72
33
27
5
33
1.80
257475--257530
21
2.5
23
88
8
80
21
32
26
19
1.97
257570--257631
21
2.8
22
85
9
90
19
37
24
19
1.94
269012--269037
13
2.0
13
100
0
52
23
7
53
15
1.67

Tables:   1

The End!