Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_016118
Parameters: 2 7 7 80 10 50 500
Length:  360271

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11749--11780
15
2.1
15
94
0
55
68
3
28
0
1.04
17112--17179
34
2.0
34
91
0
109
17
26
30
25
1.97
36281--36319
17
2.3
17
95
0
69
35
23
0
41
1.55
42560--42601
18
2.4
18
84
11
52
28
33
14
23
1.94
45130--45159
15
2.0
15
100
0
60
40
20
20
20
1.92
84526--84564
19
2.1
19
100
0
78
35
20
10
33
1.86
87053--87082
14
2.1
14
100
0
60
6
56
16
20
1.62
90893--90958
29
2.2
30
89
8
107
33
19
28
18
1.95
90904--90964
29
2.1
29
100
0
122
34
16
29
19
1.94
111841--111914
27
2.7
28
95
2
132
14
16
24
44
1.85
124664--124688
12
2.1
12
100
0
50
32
16
24
28
1.96
128304--128384
31
2.6
31
98
0
153
14
29
16
39
1.88
131884--131932
22
2.2
22
96
0
89
22
20
20
36
1.95
134304--134390
36
2.4
36
94
1
149
28
16
26
28
1.97
134506--134543
20
1.9
20
100
0
76
26
7
21
44
1.79
149597--149621
3
8.3
3
100
0
50
0
36
0
64
0.94
181781--181812
15
2.1
15
94
0
55
68
3
28
0
1.04
187144--187211
34
2.0
34
91
0
109
17
26
30
25
1.97
206313--206351
17
2.3
17
95
0
69
35
23
0
41
1.55
212592--212633
18
2.4
18
84
11
52
28
33
14
23
1.94
215162--215191
15
2.0
15
100
0
60
40
20
20
20
1.92
254558--254596
19
2.1
19
100
0
78
35
20
10
33
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
257085--257114
14
2.1
14
100
0
60
6
56
16
20
1.62
260925--260990
29
2.2
30
89
8
107
33
19
28
18
1.95
260936--260996
29
2.1
29
100
0
122
34
16
29
19
1.94
281873--281946
27
2.7
28
95
2
132
14
16
24
44
1.85
294696--294720
12
2.1
12
100
0
50
32
16
24
28
1.96
298336--298416
31
2.6
31
98
0
153
14
29
16
39
1.88
301916--301964
22
2.2
22
96
0
89
22
20
20
36
1.95
304336--304422
36
2.4
36
94
1
149
28
16
26
28
1.97
304538--304575
20
1.9
20
100
0
76
26
7
21
44
1.79
321738--321764
12
2.2
12
100
0
54
22
37
29
11
1.89
350750--350806
21
2.7
21
100
0
114
54
19
10
15
1.70

Tables:   1

The End!