Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_001660
Parameters: 2 7 7 80 10 50 500
Length:  186609

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3571--3606
14
2.6
14
81
0
54
72
11
11
5
1.28
6301--6331
14
2.2
14
94
0
53
77
12
6
3
1.08
6389--6424
18
2.0
18
88
0
54
33
16
11
38
1.84
14655--14795
27
5.1
27
64
10
79
31
9
12
46
1.74
14599--14803
56
3.7
56
88
5
283
32
9
12
45
1.74
36315--36360
24
1.9
24
90
0
74
43
15
10
30
1.81
37967--38007
21
2.0
21
100
0
82
48
4
24
21
1.69
37967--38019
21
2.5
21
90
0
79
45
3
28
22
1.70
43742--43894
76
2.0
76
88
5
229
30
13
5
50
1.62
48407--48466
24
2.5
24
88
0
84
13
36
30
20
1.90
70101--70156
27
2.1
27
89
0
85
48
14
10
26
1.76
73692--73797
52
2.0
52
100
0
212
22
20
29
27
1.99
94492--94525
16
2.1
16
94
0
59
29
35
20
14
1.93
98672--98703
15
2.1
15
94
0
55
34
21
18
25
1.96
100493--100518
10
2.6
10
100
0
52
42
7
0
50
1.31
127843--127885
22
2.0
22
82
13
54
60
25
4
9
1.47
129632--129664
13
2.5
13
100
0
66
6
6
12
75
1.16
132450--132491
11
3.8
11
78
12
50
2
7
7
83
0.89
132450--132490
22
1.9
21
90
5
64
2
4
7
85
0.81
165238--165285
25
1.9
25
86
0
69
18
29
35
16
1.93
168003--168046
18
2.4
18
96
0
79
43
29
22
4
1.73
171615--171651
17
2.2
17
100
0
74
35
5
10
48
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
186283--186324
22
2.0
21
85
4
57
35
7
7
50
1.57

Tables:   1

The End!