Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: MH545496
Parameters: 2 7 7 80 10 50 500
Length:  271601

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13610--13641
15
2.1
15
94
0
55
68
3
28
0
1.04
18766--18799
15
2.3
15
100
0
68
29
17
14
38
1.90
18772--18806
15
2.3
15
90
0
52
31
20
17
31
1.95
27496--27525
11
2.7
11
100
0
60
6
36
10
46
1.64
56195--56231
17
2.2
17
100
0
74
24
40
0
35
1.55
56448--56481
17
2.0
17
94
0
59
29
26
14
29
1.95
62558--62596
20
2.0
20
85
10
53
0
35
7
56
1.28
81936--81965
5
6.0
5
100
0
60
40
20
20
20
1.92
85813--85887
27
2.8
27
97
0
141
25
25
12
37
1.90
97778--97819
18
2.3
18
100
0
84
4
33
26
35
1.77
114306--114335
7
4.4
7
91
8
53
73
0
26
0
0.84
119707--119736
15
2.0
15
100
0
60
20
20
20
40
1.92
121672--121738
29
2.3
29
100
0
134
31
14
34
19
1.92
131936--131970
5
7.0
5
90
0
52
37
17
2
42
1.64
136233--136275
18
2.4
18
80
7
52
18
23
23
34
1.96
163822--163896
36
2.1
36
97
0
141
33
6
36
24
1.81
177805--177883
29
2.7
29
96
2
140
40
18
27
12
1.87
182239--182346
50
2.2
50
98
0
207
30
31
17
20
1.96
187334--187377
12
3.7
11
84
6
52
29
45
11
13
1.79
187329--187377
24
2.0
24
92
7
82
28
46
10
14
1.77
198600--198676
28
2.7
29
69
2
75
31
16
33
18
1.93
200696--200749
18
2.9
19
73
15
58
9
42
3
44
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
214880--214917
19
2.0
19
100
0
76
10
26
10
52
1.68
228522--228598
35
2.2
35
97
0
145
22
28
20
28
1.98
232562--232610
22
2.2
22
96
0
89
22
20
20
36
1.95
239130--239178
22
2.2
22
100
0
98
14
24
12
48
1.77
248790--248887
35
2.9
34
93
3
169
27
39
7
25
1.82
256149--256202
19
2.9
19
80
5
65
25
22
20
31
1.98
271260--271367
50
2.2
50
98
0
207
20
17
31
30
1.96

Tables:   1

The End!