Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_066808
Parameters: 2 7 7 80 10 50 500
Length:  521583

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7268--7362
47
2.0
47
100
0
190
33
6
38
21
1.78
7386--7488
17
5.7
17
66
20
66
36
5
33
23
1.79
7372--7482
37
3.0
37
100
0
222
37
5
35
21
1.77
7403--7465
20
3.3
20
66
20
62
39
4
34
20
1.74
7489--7571
41
2.0
41
100
0
166
20
14
21
43
1.87
7654--7708
17
3.3
17
69
5
58
32
20
3
43
1.69
7642--7707
33
2.0
33
100
0
132
39
15
6
39
1.72
7643--7695
16
3.2
16
68
5
52
43
13
7
35
1.72
7688--7739
26
2.0
26
100
0
104
26
19
3
50
1.65
7745--7806
31
2.0
31
100
0
124
48
22
12
16
1.80
7903--7978
38
2.0
38
100
0
152
26
23
26
23
2.00
12352--12408
28
2.0
28
100
0
114
31
7
31
29
1.84
26089--26169
39
2.0
41
90
4
130
32
18
27
22
1.97
42197--42235
16
2.4
16
86
4
51
20
33
15
30
1.94
68656--68685
12
2.5
12
94
0
51
43
10
30
16
1.81
82072--82102
7
4.4
7
100
0
62
87
0
0
12
0.55
96681--96730
25
2.0
25
100
0
100
24
16
24
36
1.94
98308--98351
21
2.1
21
95
0
79
38
13
22
25
1.91
99963--100005
18
2.4
18
81
18
54
34
25
20
18
1.96
125054--125120
21
2.9
23
72
20
68
11
25
7
55
1.62
173664--173792
34
3.8
34
97
0
240
25
7
40
26
1.82
194100--194149
25
2.0
25
100
0
100
24
16
24
36
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
195727--195770
21
2.1
21
95
0
79
38
13
22
25
1.91
197382--197424
18
2.4
18
81
18
54
34
25
20
18
1.96
222473--222539
21
2.9
23
72
20
68
11
25
7
55
1.62
247724--247767
20
2.1
21
91
4
72
52
4
34
9
1.54
315481--315553
36
2.0
36
100
0
146
30
21
19
28
1.98
315766--315833
26
2.4
31
76
23
101
29
32
8
29
1.87
315776--315834
26
2.3
26
100
0
118
27
32
8
32
1.87
320279--320407
34
3.8
34
97
0
240
26
40
7
25
1.82
343112--343141
12
2.5
12
94
0
51
43
10
30
16
1.81
356528--356558
7
4.4
7
100
0
62
87
0
0
12
0.55
371137--371186
25
2.0
25
100
0
100
24
16
24
36
1.94
372764--372807
21
2.1
21
95
0
79
38
13
22
25
1.91
374419--374461
18
2.4
18
81
18
54
34
25
20
18
1.96
399510--399576
21
2.9
23
72
20
68
11
25
7
55
1.62
448120--448248
34
3.8
34
97
0
240
25
7
40
26
1.82
472242--472284
18
2.4
18
81
18
54
18
20
25
34
1.96
473896--473939
21
2.1
21
95
0
79
25
22
13
38
1.91
475517--475566
25
2.0
25
100
0
100
36
24
16
24
1.94
490145--490175
7
4.4
7
100
0
62
12
0
0
87
0.55
503562--503591
12
2.5
12
94
0
51
16
30
10
43
1.81

Tables:   1

The End!