Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_065232
Parameters: 2 7 7 80 10 50 500
Length:  535727

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3060--3102
18
2.4
18
81
18
54
18
20
25
34
1.96
4482--4523
21
2.0
21
100
0
84
52
23
19
4
1.65
31194--31233
21
2.0
20
90
5
62
42
25
10
22
1.84
68665--68707
17
2.5
17
84
0
59
32
6
16
44
1.74
136042--136176
30
4.5
30
100
0
270
12
37
12
37
1.81
151128--151173
22
2.0
23
87
4
67
17
23
15
43
1.87
161821--161875
17
3.0
19
79
15
62
34
3
23
38
1.73
180705--180783
39
2.0
39
95
0
140
21
26
18
32
1.97
225200--225227
14
2.0
14
100
0
56
42
14
14
28
1.84
289347--289431
22
3.5
22
71
20
80
28
24
29
17
1.97
324877--324914
20
1.9
20
89
10
60
23
10
34
31
1.89
327811--327840
14
2.1
14
93
0
51
20
20
13
46
1.83
331580--331621
21
2.0
21
100
0
84
42
23
0
33
1.55
339276--339318
18
2.4
18
81
18
54
18
20
25
34
1.96
340698--340739
21
2.0
21
100
0
84
52
23
19
4
1.65
359465--359528
30
2.1
30
88
0
92
26
15
37
20
1.92
359751--359800
25
2.0
25
88
0
73
40
20
26
14
1.90
363324--363370
22
2.2
21
85
11
60
4
23
4
68
1.26
393497--393558
30
2.1
30
100
0
124
33
9
32
24
1.88
410381--410438
18
3.2
17
80
9
62
46
20
15
17
1.84
411636--411662
14
1.9
14
100
0
54
37
14
22
25
1.93
415347--415384
19
2.0
19
94
0
67
15
26
23
34
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
417257--417326
36
1.9
36
91
5
115
12
32
35
18
1.89
421478--421525
21
2.3
21
88
0
69
10
18
18
52
1.74
441807--441841
17
2.1
17
94
0
61
25
20
22
31
1.98
482256--482318
21
3.0
21
100
0
126
28
28
14
28
1.95
487546--487588
18
2.6
16
82
10
52
25
32
20
20
1.97
490575--490677
31
3.3
31
100
0
206
11
40
11
35
1.78
532036--532075
20
2.0
20
100
0
80
20
40
15
25
1.90

Tables:   1

The End!