Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_052880
Parameters: 2 7 7 80 10 50 500
Length:  384977

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1685--1718
14
2.5
14
90
4
52
23
38
14
23
1.92
18886--18964
39
2.0
39
92
0
131
21
27
18
31
1.97
55284--55309
13
2.0
13
100
0
52
53
0
23
23
1.46
79859--79912
22
2.5
22
85
8
67
27
9
48
14
1.75
79876--79920
21
2.1
22
87
4
65
26
15
37
20
1.92
103720--103759
18
2.5
15
78
21
53
40
12
32
15
1.84
103725--103759
18
1.9
18
100
0
70
40
11
31
17
1.85
114678--114715
20
1.9
20
89
10
60
31
34
10
23
1.89
170907--170943
18
2.1
18
94
0
65
56
16
21
5
1.59
170945--170993
24
2.0
24
88
0
71
59
8
10
22
1.56
170968--171023
18
3.1
18
77
10
60
57
8
16
17
1.64
170953--171005
24
2.2
24
82
0
61
58
5
15
20
1.57
170955--171066
30
3.5
30
74
17
118
56
8
15
20
1.64
202698--202750
24
2.2
24
96
0
97
30
20
41
7
1.80
227787--227826
8
4.6
8
82
17
53
50
0
2
47
1.14
227779--227821
19
2.3
19
100
0
86
53
0
4
41
1.21
235514--235539
13
2.0
13
100
0
52
15
15
23
46
1.83
237001--237041
18
2.3
17
87
8
55
26
17
29
26
1.97
262290--262332
18
2.6
16
82
10
52
25
32
20
20
1.97
279509--279543
17
2.1
17
100
0
70
45
28
11
14
1.79
308216--308252
17
2.3
17
90
9
60
51
0
0
48
1.00
324358--324469
30
3.5
30
74
17
118
20
15
8
56
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
324389--324499
42
2.6
42
68
13
102
18
14
9
56
1.65
324401--324456
18
3.1
18
77
10
60
17
16
8
57
1.64
324419--324479
24
2.5
24
83
0
68
21
13
6
59
1.57
324481--324517
18
2.1
18
94
0
65
5
21
16
56
1.59

Tables:   1

The End!