Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_045228
Parameters: 2 7 7 80 10 50 500
Length:  434980

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
494--546
24
2.2
24
96
0
97
7
41
20
30
1.80
36002--36044
18
2.6
16
82
10
52
25
32
20
20
1.97
44543--44621
39
2.0
39
95
0
140
21
29
18
30
1.97
80922--80947
13
2.0
13
100
0
52
53
0
23
23
1.46
99505--99556
21
2.5
21
100
0
104
28
38
5
26
1.79
101270--101305
15
2.4
15
100
0
72
47
0
30
22
1.52
132596--132635
8
4.6
8
82
17
53
50
0
2
47
1.14
132588--132630
19
2.3
19
100
0
86
53
0
4
41
1.21
138296--138348
24
2.2
24
96
0
97
7
41
20
30
1.80
160242--160283
21
2.0
20
86
4
57
14
42
4
38
1.66
165405--165503
30
3.1
30
71
20
101
19
15
9
56
1.65
165423--165533
42
2.6
42
68
13
102
18
14
9
56
1.65
165435--165490
18
3.1
18
77
10
60
17
16
8
57
1.64
165453--165513
24
2.5
24
83
0
68
21
13
6
59
1.57
165515--165551
18
2.1
18
94
0
65
5
21
16
56
1.59
262144--262239
30
3.2
30
64
21
83
26
13
25
35
1.93
284272--284314
18
2.4
18
81
18
54
34
25
20
18
1.96
293793--293829
17
2.2
17
90
0
56
43
18
8
29
1.79
340444--340481
20
1.9
20
89
10
60
23
10
34
31
1.89
351392--351426
18
1.9
18
100
0
70
17
31
11
40
1.85
375236--375289
22
2.5
23
85
8
69
14
48
9
27
1.75
404262--404295
14
2.5
14
90
4
52
23
14
38
23
1.92

Tables:   1

The End!