Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_039660
Parameters: 2 7 7 80 10 50 500
Length:  475396

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4052--4083
12
2.8
12
95
4
57
46
9
6
37
1.61
5955--6017
27
2.3
26
76
12
65
58
6
12
22
1.56
10889--10913
1
25.0
1
100
0
50
0
0
100
0
0.00
12810--12840
16
2.0
15
93
6
53
16
6
6
70
1.29
13787--13988
101
2.0
101
100
0
404
27
13
20
37
1.91
16848--16950
50
2.1
50
100
0
206
24
16
15
43
1.86
17165--17203
21
1.9
20
89
5
60
35
10
23
30
1.88
17289--17323
17
2.1
17
100
0
70
22
17
0
60
1.37
39286--39336
15
3.3
15
94
2
84
60
0
15
23
1.35
39457--39498
17
2.5
17
84
3
50
47
2
2
47
1.28
43967--44003
15
2.6
14
88
12
58
40
8
13
37
1.74
43974--44003
15
2.0
15
100
0
60
40
6
13
40
1.71
44662--44697
9
4.3
9
80
20
51
44
0
22
33
1.53
44665--44694
15
2.0
15
100
0
60
40
0
26
33
1.57
49715--49778
17
3.7
18
79
6
69
53
4
4
37
1.43
49756--49791
18
2.0
18
88
0
54
61
0
2
36
1.11
56564--56596
15
2.2
15
100
0
66
42
18
0
39
1.50
57224--57267
20
2.3
19
80
4
52
54
11
0
34
1.36
58396--58422
13
2.1
13
100
0
54
22
7
0
70
1.12
71512--71543
16
2.0
16
93
0
55
59
3
12
25
1.48
71529--71554
13
2.0
13
100
0
52
46
7
15
30
1.74
73685--73723
14
2.6
15
92
8
62
48
7
0
43
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88121--88219
27
3.7
27
100
0
198
51
18
22
8
1.72
89484--89551
21
3.2
21
82
0
82
11
22
7
58
1.57
90163--90197
15
2.3
15
100
0
70
40
22
5
31
1.78
91917--91992
9
8.4
9
94
0
134
34
7
32
25
1.85
99536--99571
18
2.0
18
100
0
72
50
11
33
5
1.61
99871--99896
13
2.0
13
100
0
52
23
7
7
61
1.49
100194--100231
19
2.0
19
100
0
76
31
5
5
57
1.43
199118--199152
17
2.1
17
88
0
52
40
11
34
14
1.82
230670--230696
13
2.1
13
100
0
54
22
7
14
55
1.64
368525--368549
10
2.5
10
100
0
50
60
0
28
12
1.32
381607--381631
12
2.1
12
100
0
50
36
16
40
8
1.77
414428--414470
18
2.4
18
81
18
54
18
20
25
34
1.96
427213--427238
13
2.0
13
100
0
52
30
30
7
30
1.85
454336--454366
16
1.9
16
93
0
53
16
22
0
61
1.34
457271--457295
12
2.1
12
100
0
50
40
16
8
36
1.77
468442--468466
12
2.1
12
100
0
50
40
0
0
60
0.97
472874--472918
6
6.7
7
82
12
51
11
0
2
86
0.65
472872--472917
18
2.6
18
82
6
58
10
0
2
86
0.64
472874--472918
21
2.3
19
88
7
63
11
0
2
86
0.65
473452--473482
16
1.9
16
93
0
53
61
0
22
16
1.34

Tables:   1

The End!