Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_029130
Parameters: 2 7 7 80 10 50 500
Length:  978846

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 512 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
924338--924369
16
2.0
16
100
0
64
25
12
43
18
1.85
927778--927802
13
1.9
13
100
0
50
12
8
48
32
1.69
928877--928918
22
1.9
22
100
0
84
30
33
16
19
1.94
929597--929640
22
2.0
22
100
0
88
13
36
22
27
1.92
932782--932806
13
1.9
13
100
0
50
40
8
16
36
1.77
932914--932954
20
2.0
20
95
0
73
19
19
46
14
1.84
933079--933141
29
2.1
30
91
8
101
36
4
33
25
1.77
935357--935387
5
6.2
5
100
0
62
61
38
0
0
0.96
935356--935426
3
25.0
3
72
16
53
56
39
4
0
1.19
935392--935430
12
3.2
12
88
3
51
56
43
0
0
0.99
937867--937922
28
2.0
28
100
0
112
35
46
10
7
1.66
945265--945291
13
2.1
13
100
0
54
22
29
25
22
1.99
946688--946724
12
3.1
12
92
0
56
56
37
0
5
1.22
946688--946722
18
1.9
18
88
0
52
57
40
0
2
1.14
950939--950972
17
2.0
17
100
0
68
17
35
11
35
1.87
950977--951013
5
7.4
5
93
0
65
18
43
18
18
1.89
951902--951946
22
2.0
22
100
0
90
26
31
17
24
1.97
952509--952534
13
2.0
13
100
0
52
23
15
46
15
1.83
956369--956426
29
2.0
29
100
0
116
24
44
17
13
1.85
957841--957866
5
5.2
5
100
0
52
42
19
38
0
1.51
957871--957904
5
6.4
5
87
12
50
17
0
38
44
1.49
957873--957905
17
1.9
17
100
0
66
18
0
36
45
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
965018--965051
17
2.0
17
100
0
68
17
41
23
17
1.90
965958--965996
19
2.1
19
100
0
78
15
46
15
23
1.83
966399--966435
18
2.1
18
100
0
74
10
16
51
21
1.74
967553--967601
23
2.1
23
96
0
89
34
26
28
10
1.89
969827--969854
6
4.7
6
100
0
56
14
0
35
50
1.43
971245--971285
16
2.6
16
100
0
82
26
24
26
21
2.00
973681--973718
19
2.0
19
100
0
76
5
21
47
26
1.71
975054--975102
24
2.0
24
100
0
98
12
4
48
34
1.59
978789--978829
21
2.0
21
90
0
64
21
63
4
9
1.44
978800--978838
16
2.4
16
91
0
69
20
61
7
10
1.52

Tables:   1   2   3   4   5

The End!