Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_068217
Parameters: 2 7 7 80 10 50 500
Length:  1678054

Tables:   1   2   

This is table  2  of  2  ( 161 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1284152--1284178
13
2.1
13
100
0
54
48
22
0
29
1.51
1293703--1293744
21
2.0
21
100
0
84
19
28
14
38
1.90
1308763--1308864
33
3.1
33
97
0
186
11
30
20
37
1.89
1335988--1336028
20
2.0
21
86
13
59
43
4
21
29
1.73
1348898--1348922
12
2.1
12
100
0
50
0
24
24
52
1.48
1365011--1365038
14
2.0
14
100
0
56
50
0
21
28
1.49
1371585--1371621
18
2.1
18
94
0
65
45
8
21
24
1.78
1420514--1420547
17
2.0
17
100
0
68
52
17
11
17
1.73
1434175--1434203
14
2.1
14
100
0
58
31
13
20
34
1.92
1439902--1439944
22
2.0
22
90
9
70
39
20
11
27
1.88
1459374--1459418
20
2.2
20
92
0
72
22
33
6
37
1.80
1466937--1466981
23
2.0
23
90
0
72
26
28
13
31
1.94
1473299--1473344
23
2.0
23
95
0
83
30
10
26
32
1.90
1476793--1476817
12
2.1
12
100
0
50
32
16
8
44
1.76
1478336--1478392
22
2.5
23
83
11
73
28
28
22
21
1.99
1481519--1481575
28
2.0
28
100
0
114
40
10
17
31
1.84
1481665--1481702
19
2.0
19
100
0
76
15
21
26
36
1.93
1485358--1485409
27
1.9
27
96
0
95
38
21
21
19
1.94
1488966--1489031
33
2.0
33
100
0
132
24
24
9
42
1.83
1503865--1503895
16
1.9
16
100
0
62
19
22
19
38
1.93
1509675--1509706
16
2.0
16
93
0
55
31
12
21
34
1.91
1511291--1511315
13
1.9
13
100
0
50
24
16
8
52
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1522412--1522449
19
2.0
19
89
0
58
18
26
15
39
1.91
1522466--1522525
30
2.0
30
100
0
120
16
20
6
56
1.62
1526364--1526419
26
2.1
27
90
6
89
16
17
19
46
1.84
1529350--1529390
20
2.0
20
100
0
82
26
9
24
39
1.86
1530736--1530818
41
2.0
41
100
0
166
24
33
9
32
1.88
1537506--1537550
20
2.2
20
80
0
54
44
4
31
20
1.71
1582863--1582893
15
2.1
15
100
0
62
16
19
19
45
1.86
1589733--1589772
21
2.0
21
85
9
57
30
30
7
32
1.85
1598928--1598980
16
3.2
16
78
2
61
13
16
5
64
1.47
1601492--1601525
18
1.9
17
88
5
50
20
35
0
44
1.52
1621193--1621265
18
3.7
19
76
16
69
12
30
8
49
1.69
1621210--1621254
23
2.0
23
90
0
72
11
31
6
51
1.63
1621503--1621547
22
2.1
21
87
4
63
31
13
31
24
1.93
1621616--1621673
29
2.0
29
100
0
116
17
24
31
27
1.97
1628635--1628660
13
2.0
13
100
0
52
15
23
0
61
1.33
1632858--1632887
15
2.0
15
93
0
51
26
10
20
43
1.83
1641628--1641669
21
2.0
21
100
0
84
9
23
47
19
1.78
1644763--1644820
29
2.0
29
100
0
116
34
10
20
34
1.87
1656642--1656695
27
2.0
27
88
0
81
22
25
9
42
1.83

Tables:   1   2

The End!