Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_065221
Parameters: 2 7 7 80 10 50 500
Length:  335549

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8162--8217
25
2.2
25
81
15
78
53
8
23
14
1.68
8932--8971
15
2.7
15
88
3
55
80
0
20
0
0.72
20322--20355
15
2.3
15
89
0
50
11
47
2
38
1.55
28639--28709
35
2.0
35
100
0
142
26
5
36
30
1.80
28769--28798
6
5.2
6
92
8
53
53
13
0
33
1.40
28769--28798
11
2.6
12
89
10
53
53
13
0
33
1.40
48129--48173
22
2.0
22
100
0
90
64
17
13
4
1.44
67864--67938
21
3.4
21
83
5
78
56
9
21
13
1.65
67856--67938
24
3.7
23
75
18
77
54
8
24
13
1.66
69935--69983
24
2.0
24
100
0
98
36
24
8
30
1.85
72659--72690
15
2.1
15
100
0
64
6
46
12
34
1.67
79606--79653
24
2.0
24
100
0
96
29
16
4
50
1.64
124731--124773
18
2.4
18
81
18
54
34
25
20
18
1.96
134053--134082
15
2.0
15
100
0
60
26
33
26
13
1.93
150395--150458
21
3.0
21
100
0
128
23
14
18
43
1.86
179022--179064
18
2.4
18
92
0
68
65
0
13
20
1.27
189065--189092
14
2.0
14
100
0
56
42
14
14
28
1.84
193811--193850
16
2.4
17
91
8
73
32
0
0
67
0.91
193820--193855
16
2.2
16
90
0
54
38
0
2
58
1.13
194020--194055
18
2.0
18
100
0
72
22
16
16
44
1.86
195224--195258
17
2.1
17
94
0
61
48
8
5
37
1.58
195247--195281
15
2.3
15
95
0
61
42
0
11
45
1.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
196693--196737
23
2.0
23
95
0
81
37
22
17
22
1.94
208176--208264
34
2.6
34
98
0
169
28
7
38
25
1.84
209781--209814
17
2.0
17
100
0
68
29
17
35
17
1.93
221494--221531
19
2.0
19
100
0
76
10
31
10
47
1.72
233960--234008
24
2.0
24
100
0
98
16
16
0
67
1.24
239362--239406
20
2.2
20
96
0
81
28
15
31
24
1.96
239575--239601
13
2.1
13
100
0
54
29
7
14
48
1.71
242696--242774
39
2.0
39
95
0
140
21
26
18
32
1.97
266050--266111
32
1.9
32
93
0
106
27
11
22
38
1.88
287942--287982
13
3.4
13
74
19
52
56
0
4
39
1.21
299450--299490
21
2.0
21
90
0
64
14
34
19
31
1.92
311509--311536
12
2.3
12
100
0
56
39
10
14
35
1.81
318629--318671
18
2.4
18
81
18
54
18
20
25
34
1.96
333705--333732
14
2.0
14
100
0
56
42
7
7
42
1.59

Tables:   1

The End!