Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_061056
Parameters: 2 7 7 80 10 50 500
Length:  162460

Tables:   1   2   

This is table  2  of  2  ( 192 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54363--54389
13
2.1
13
100
0
54
22
7
0
70
1.12
54362--54412
18
2.8
18
76
8
50
21
3
1
72
1.11
54599--54731
66
2.0
66
100
0
266
42
4
4
48
1.43
54789--54817
10
2.9
10
100
0
58
31
6
10
51
1.62
54855--54893
20
2.0
20
85
10
53
33
5
23
38
1.77
55230--55308
20
3.9
21
86
5
117
39
17
11
31
1.85
55230--55307
41
1.9
40
92
2
129
39
17
11
30
1.86
56229--56264
18
2.0
18
100
0
72
38
5
5
50
1.49
61145--61170
13
2.0
13
100
0
52
46
7
0
46
1.31
63280--63308
14
2.1
14
100
0
58
65
13
6
13
1.45
63614--63638
12
2.1
12
100
0
50
36
8
16
40
1.77
63757--63812
11
4.6
13
78
17
59
66
8
0
25
1.21
63764--63823
19
3.3
19
77
11
72
68
8
0
23
1.16
63764--63840
11
6.7
11
77
14
75
68
9
0
22
1.17
66358--66386
14
2.1
14
100
0
58
24
0
13
62
1.32
69758--69802
15
3.0
15
100
0
90
33
0
13
53
1.40
69951--69975
12
2.1
12
100
0
50
52
16
24
8
1.70
70195--70225
11
2.8
11
100
0
62
74
6
9
9
1.23
70378--70418
17
2.5
17
96
4
75
26
0
7
65
1.18
70956--70987
15
2.1
16
94
5
57
37
25
0
37
1.56
71588--71629
21
2.0
21
100
0
84
19
23
0
57
1.41
71703--71755
15
3.6
15
85
12
74
39
7
0
52
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71714--71756
19
2.2
20
84
12
63
39
6
0
53
1.28
71751--71787
18
2.1
18
100
0
74
45
0
21
32
1.52
71784--71815
16
2.0
16
100
0
64
56
0
31
12
1.37
71806--71838
12
2.8
12
95
0
57
66
0
9
24
1.20
73015--73061
17
2.8
16
90
6
58
68
0
8
23
1.17
73878--73913
18
2.0
18
94
0
63
36
5
5
52
1.48
76548--76581
17
2.0
17
94
0
59
17
20
5
55
1.62
77552--77589
18
2.1
18
95
0
67
23
18
10
47
1.79
77593--77633
11
3.9
11
79
20
52
65
0
0
34
0.93
77593--77633
16
2.6
16
84
7
57
65
0
0
34
0.93
87483--87528
4
11.0
4
82
17
58
28
2
0
69
1.00
87483--87528
21
2.2
20
88
11
74
28
2
0
69
1.00
87483--87528
17
2.8
16
81
18
58
28
2
0
69
1.00
87463--87528
34
1.9
33
85
11
89
28
3
1
66
1.15
89670--89704
14
2.5
15
90
9
56
34
0
5
60
1.21
92432--92462
12
2.6
12
100
0
62
25
6
19
48
1.72
94799--94888
21
4.1
21
84
4
90
12
22
7
57
1.60
94821--94888
21
3.2
21
87
0
91
11
20
7
60
1.55
97241--97297
18
3.2
17
92
5
87
29
7
28
35
1.83
99444--99468
12
2.1
12
100
0
50
56
8
8
28
1.57
100232--100259
14
2.0
14
100
0
56
28
14
0
57
1.38
100239--100297
16
3.5
17
77
13
59
37
6
0
55
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
100238--100296
7
8.9
7
76
12
54
37
5
0
57
1.21
100291--100332
11
4.1
11
82
17
63
54
9
0
35
1.33
100293--100339
19
2.5
19
100
0
94
59
10
0
29
1.31
100532--100557
13
2.0
13
100
0
52
15
15
0
69
1.20
105044--105083
14
2.9
14
85
3
55
30
2
2
65
1.19
105592--105636
23
1.9
24
95
4
83
22
8
8
60
1.55
105964--105997
16
2.1
16
94
0
59
52
0
14
32
1.42
119185--119224
19
2.1
19
100
0
80
42
0
0
57
0.98
120035--120070
12
3.0
12
83
0
54
16
0
13
69
1.19
120094--120137
7
6.3
7
86
0
61
68
0
2
29
1.02
120087--120132
14
3.2
14
96
3
83
63
0
0
36
0.95
120161--120185
12
2.1
12
100
0
50
48
8
8
36
1.62
120234--120265
15
2.1
15
100
0
64
59
6
6
28
1.46
130754--130808
21
2.6
21
74
5
58
58
0
7
34
1.26
132135--132169
18
1.9
18
88
0
52
17
8
2
71
1.23
134441--134476
15
2.4
15
95
0
63
0
25
5
69
1.10
146278--146311
16
2.1
16
94
0
59
32
14
0
52
1.42
146639--146683
23
1.9
24
95
4
83
60
8
8
22
1.55
147192--147231
14
2.9
14
85
3
55
65
2
2
30
1.19
151718--151743
13
2.0
13
100
0
52
69
0
15
15
1.20
151943--151984
11
4.1
11
82
17
63
35
0
9
54
1.33
151936--151982
19
2.5
19
100
0
94
29
0
10
59
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151978--152036
18
3.4
18
77
9
61
55
0
6
37
1.26
152016--152043
14
2.0
14
100
0
56
57
0
14
28
1.38
152807--152831
12
2.1
12
100
0
50
28
8
8
56
1.57
154978--155034
18
3.2
18
92
5
89
35
28
7
29
1.83
157387--157476
21
4.1
21
82
5
90
57
7
22
12
1.60
159813--159843
12
2.6
12
100
0
62
48
19
6
25
1.72

Tables:   1   2

The End!