Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_060491
Parameters: 2 7 7 80 10 50 500
Length:  484858

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49765--49810
22
2.1
22
88
4
67
10
36
15
36
1.82
52297--52324
14
2.0
14
100
0
56
42
14
14
28
1.84
53908--53952
22
2.0
22
87
8
65
28
17
4
48
1.66
79979--80057
39
2.0
39
95
0
140
32
18
26
21
1.97
81078--81176
30
3.3
30
100
0
198
36
12
39
12
1.80
88847--88979
63
2.1
63
88
0
194
15
26
12
45
1.82
99110--99150
17
2.4
18
84
12
59
34
29
4
31
1.79
121267--121341
30
2.5
30
100
0
150
12
38
12
37
1.79
136409--136451
18
2.6
16
82
10
52
25
32
20
20
1.97
184128--184158
2
15.5
2
93
0
53
45
3
0
51
1.17
187053--187092
21
2.0
20
90
5
62
22
10
25
42
1.84
197564--197613
25
2.0
25
88
0
73
14
26
20
40
1.90
197835--197899
30
2.2
30
85
0
94
21
36
15
26
1.93
224976--225018
18
2.4
18
81
18
54
34
25
20
18
1.96
279534--279567
16
2.1
16
94
0
59
32
17
14
35
1.91
286748--286798
27
2.0
25
84
7
66
33
23
33
9
1.88
308984--309046
21
3.0
21
100
0
126
28
28
14
28
1.95
349561--349591
2
15.5
2
93
0
53
51
0
0
48
1.00
355804--355900
51
1.9
51
89
4
151
35
21
25
17
1.95
355856--355894
19
2.0
19
90
5
60
35
17
28
17
1.94
370487--370524
19
2.0
19
94
0
67
34
23
26
15
1.95
374241--374267
14
1.9
14
100
0
54
25
22
14
37
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
375472--375529
18
3.2
17
80
9
62
17
15
20
46
1.84
411778--411820
17
2.5
17
84
0
59
32
6
16
44
1.74

Tables:   1

The End!