Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_058846
Parameters: 2 7 7 80 10 50 500
Length:  293897

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30226--30255
12
2.6
12
94
5
53
53
0
13
33
1.40
67850--67926
12
6.5
12
87
3
102
9
55
0
35
1.31
67860--67926
35
1.9
35
93
0
116
10
52
0
37
1.36
89226--89261
7
5.1
7
100
0
72
41
0
30
27
1.56
99556--99592
9
4.1
9
100
0
74
32
21
0
45
1.52
113222--113249
14
2.0
14
100
0
56
14
7
0
78
0.95
113556--113621
32
2.1
32
97
0
123
25
9
24
40
1.84
118250--118290
20
2.0
20
100
0
82
4
29
14
51
1.63
138769--138845
12
6.5
12
87
3
102
9
55
0
35
1.31
138779--138845
35
1.9
35
93
0
116
10
52
0
37
1.36
144538--144565
14
2.0
14
100
0
56
14
7
0
78
0.95
144872--144937
32
2.1
32
97
0
123
25
9
24
40
1.84
149566--149606
20
2.0
20
100
0
82
4
29
14
51
1.63
169008--169042
16
2.2
16
100
0
70
37
17
28
17
1.92
171140--171172
17
1.9
17
100
0
66
51
6
12
30
1.63
188359--188418
10
6.0
10
100
0
120
60
20
10
10
1.57
192342--192373
15
2.1
15
100
0
64
34
12
18
34
1.89
193939--193974
16
2.2
16
90
0
54
55
30
8
5
1.52
205908--205939
15
2.1
15
94
0
55
9
31
12
46
1.73
239945--240081
71
1.9
71
91
4
224
35
13
27
22
1.92
268574--268605
15
2.1
15
94
0
55
9
31
12
46
1.73
275406--275454
24
2.0
24
96
0
89
38
24
22
14
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
283840--283906
25
2.7
25
90
0
116
40
16
26
16
1.89
286391--286434
15
2.9
15
100
0
88
47
13
18
20
1.82
288657--288746
27
3.3
27
93
0
144
32
21
18
27
1.97
293108--293143
7
5.1
7
100
0
72
41
0
30
27
1.56

Tables:   1

The End!