Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NC_058733
Parameters: 2 7 7 80 10 50 500
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 500
Length: 608983
ACGTcount: A:0.27, C:0.23, G:0.22, T:0.28
Found at i:17523 original size:15 final size:16
Alignment explanation
Indices: 17493--17525 Score: 50
Period size: 15 Copynumber: 2.1 Consensus size: 16
17483 TTCTATTCTA
*
17493 ATTATAGGATTCTATT
1 ATTATAGGATTATATT
17509 ATTATA-GATTATATT
1 ATTATAGGATTATATT
17524 AT
1 AT
17526 ATATTATATA
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
15 10 0.62
16 6 0.38
ACGTcount: A:0.36, C:0.03, G:0.09, T:0.52
Consensus pattern (16 bp):
ATTATAGGATTATATT
Left flanking sequence: Indices 16993 -- 17492
GCAAGTTCAGTCTTTTCAGGGCGAGCTGACCGCAGAAACCGTAGACTTCCATGATGAACCCACCT
TAGCCACCTCCGATCAGACAGAAAGATGCGATCGTTAGAGATTCGACGATTCCCGGTTGGACCTA
TTCAAGCGATTGAACGAGATACTCGACAACTAGAAAGACGCACTTGAATACTGAATGCTATGAGG
AGAAAGAATGACTATCACCAACCATAAAGACGATAAAAGAAGGCACTCCCGTTCCCCCGAAATCA
TCTTCTGTGCGTGGTTATCCAATCATGATGTGGTAGGCTTAGTAGGGCTCGAACCTACAATCTAA
CCGTTATGAGCGGTACGTTTCAACCAATTAAACTATAAGCCCCTACAGATCTCTACATGCAATTC
GCTCACTTCGGGAAGAGCGGACGGAAGGCGACGGGGAGGCCTTTGCTCTATCTGCTTCTTCCTCT
TCTCAGGAATGAAGAATTAGATAAAAAAAAATGGATTCTATTCTA
Right flanking sequence: Indices 17526 -- 18025
ATATTATATATATAATATTCTATATCTATTATTAGAATGAATAATATAATTAAGCAAGCGGCCCT
TTTGCGACTCAAACTGCCGGTACGCTTTCCGGCTCGCAACGACTCAAACGGGCGGAGGCTCTCTA
TTTGCTTGCACTGCCGGCTGTTCGCCTTTAGTTAGAAGTAGAAGTCGCTCTTTGCCCCACACTTC
TAAAAAAGTATGGATTAATTCAGTAAGAAAAAAAAAACTTGGTTACGGGAACCGAAGGTTAGGCC
GACTACTTACTTTCTCCTTACCCTTAACAGGATTGTCTCCTACCGATCGAGGAAAGGCTTAGAAT
CCATGCTTTGACCGGTAATGTCCAATCTAAGAACGTCTTGTGCCTTTTCCTGGGCCCCCTTCATT
CTGACTTAGCTAATTCAATTCTTTCTATTTCTAATGGGCTTATACTTTTTTCTATATCCCCCGAG
AAAAGAAAGTCCTGCTATATCTAATGTATTTTTTCCAGGACCGCT
Found at i:40332 original size:19 final size:19
Alignment explanation
Indices: 40308--40346 Score: 53
Period size: 19 Copynumber: 2.1 Consensus size: 19
40298 CAAAGAGCTG
40308 TTTTCTTTCTTGCTT-TGTT
1 TTTTC-TTCTTGCTTCTGTT
*
40327 TTTTCTTGTTGCTTCTGTT
1 TTTTCTTCTTGCTTCTGTT
40346 T
1 T
40347 GGGCTTGCTC
Statistics
Matches: 18, Mismatches: 1, Indels: 2
0.86 0.05 0.10
Matches are distributed among these distances:
18 8 0.44
19 10 0.56
ACGTcount: A:0.00, C:0.15, G:0.13, T:0.72
Consensus pattern (19 bp):
TTTTCTTCTTGCTTCTGTT
Left flanking sequence: Indices 39808 -- 40307
TTCTCCATCCGCCCGCCAGCAGCAGGGGGGTTCGATTCCCGTTATACGCGATGTGGCGAAGAAAA
GCGCTTGTTATTTGCGGAAAGGAAGAAGTCATCCCTCTTGCTGGAGGAAACTACCTTTCTATCCT
TCTCCTGCCCCTCTCAGTTGGAAAAAGGGCTTTCGACTTTCCCTAATCTCCTTTGCTCCCTAATC
CATTCCCGGTGCCATTCAACTATCTGACAATAGAGTATCTAAGTCAAAGCTGTTCCCGGGTTCAG
GTGAAGAATGTTAGAAAGACTCTCATGAAAAAAACCTCTAACTTGGTTCGAGTGGCTGATAGCTG
CTTATCGCTCCTGTCCAGTCATCTTAGTCCATGGCTTCTGTTTCATGCTTGGTTGATGGAAGACA
GCTTTGAGTGCCGTTACTTTCCCCCTCCATGCTTGAAGTTCATTCCTCCGTTGTGCTTTGTCTGT
CATCTTCTTTCTTCCCTTCCTCGGGCACAGTAAGACAAAGAGCTG
Right flanking sequence: Indices 40347 -- 40846
GGGCTTGCTCCTCTGTTATCCCTGACTCCCTAAACTTAATGAATGAAGGAAGGGTCTCCGCTCCT
TACCCTATCGGGCAAGTGGCTTACACTCCTTGCTTGCTTTCATCCTGCTTTTAGTGCCGCTTGCT
TGCTCGAAGGAGGGGCTACCGCTCTTTAACCTCGTCGGTAAAGCGGCTTGAATAGGACTTTCCCT
ATTTTCATTGGCCTTTTCTTCGATGTCAATGTGCTCAGGTCCTTTCTTTGCCCCTTCCCTTGGGT
TGGGCTCTCCCTCAAATGCCCTTTCCCTTCGTTATCTCTACATGAGTGAAACTCAAGCACTCGAA
TATCAGTAGATTAGCGTCACGCCAACGCAACTCTCAAACCATCGGCGAGAGGAGAGTAGGTCCGG
CTATGACTTTCATAGGAACCGTTGGGCCACTATGTCATAGTGAGAGTAGGGACCCATCCCATATG
ACTCAGAGTCAAAGAAAGCTCTTAGCCTCCGACCAGTGAAGATCA
Found at i:86667 original size:15 final size:15
Alignment explanation
Indices: 86647--86676 Score: 60
Period size: 15 Copynumber: 2.0 Consensus size: 15
86637 AGGTTATAGC
86647 CTTTTATTTTACTTA
1 CTTTTATTTTACTTA
86662 CTTTTATTTTACTTA
1 CTTTTATTTTACTTA
86677 TTCAATTTAA
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 15 1.00
ACGTcount: A:0.20, C:0.13, G:0.00, T:0.67
Consensus pattern (15 bp):
CTTTTATTTTACTTA
Left flanking sequence: Indices 86147 -- 86646
CTCATAAACCCAATAAAAAAAGTTTCACCCAGGTATACATATCCTTAGCTTGCGCCCTATTTGAG
ACTAAGGCAGGGAACCCTGTCCTATCACCTTTATCAAATCCCTAGCTCTATTCCTTAGTGCAACT
GTCCTATTCCTACCATGGAAATATCTATCTTTCTTTTGTTCTATAGTTTCGGATAGAAAAGCGGA
CGGTATCATATATGAAGAAAGAGATTTAAAAGCCATAAGTCGTGCTAGCAACAGTCTTACTGTCT
TGGCTCCTTTGCCCCGGTCTTTTCTTTTTATAAAGTAGCACGTTCCTCTACGAAGGTGCGTTTTA
GGCCACGGTAGCAAGTGTTCTGTAAGGAGCTGTGGGACTAAAAGGCTTATGCTTATCGAGCCCTT
AATTAAGAGGAAGATGTGATTTAGTTTTCCCTGTTTTTCGCAAGTTAATCAGAATCGGCAAGATC
CCCTCTTGTTCTTGCTGCTTGGGAAGAGCAGGAAGAGGTTATAGC
Right flanking sequence: Indices 86677 -- 87176
TTCAATTTAAATCGCAAAAAGATGGATGGGCCAAATTGAACAAATCAATTTGCCTGTGCTATCGG
GCTACTCAGCTTCAAATCCTTCACGCTCCTTGGGATGCCTTACAGTCAGGGAATCACGAAGATGA
AACTAGACTCCTTTTTTGCAGTACCTTCGGTTGAGGTGCATTTATGATTTAATCCAAAGCCTGAG
CCTCTGAACAACCTGATGAATCGCGTTAAATGTGCTTTTCTGGCGTCTTTGAGTTTATGTTATGA
GTTGATCCTAGTTCATAGTAAGTAGAAGGTGTTACGGGTCGGCCTCGGGAATTCGAGGAGCTACT
GACGTTAAGCGTTAAGATTGGACTGCTCTTGGGGGAACAGCTTAGTCCATCTTCAACTCCTAGCA
TGAAAGTGAAAGTCTCAATCCCAGTTCCATATTAAGAAAGTAGACGGACAGAACTCCCCGACCTT
GTTAGGACCCCTTCGGATTGGTCCTCTTCTAGTCGAGTAAGGTGC
Found at i:88290 original size:20 final size:20
Alignment explanation
Indices: 88265--88303 Score: 53
Period size: 20 Copynumber: 1.9 Consensus size: 20
88255 AGGTAACTCG
88265 AGAGTA-GAAAGAACTAGAAT
1 AGAGTATGAAAGAAC-AGAAT
*
88285 AGAGTATGACAGAACAGAA
1 AGAGTATGAAAGAACAGAA
88304 CCAGTAGCTT
Statistics
Matches: 17, Mismatches: 1, Indels: 2
0.85 0.05 0.10
Matches are distributed among these distances:
20 10 0.59
21 7 0.41
ACGTcount: A:0.54, C:0.08, G:0.26, T:0.13
Consensus pattern (20 bp):
AGAGTATGAAAGAACAGAAT
Left flanking sequence: Indices 87765 -- 88264
TCTTCTTTCCCCGTTGTGAAAGGAGTTGGTTCCGTAGTTTTAGAATTCGGCTGATCCCAAGTACT
CCATCTCCATCATTGCATATTTTTATATAGAAAGTAAAGAAGAAAAGGCATAACCAGAAGAATTG
TGTAAAATAAGTGAATTTATCCAGTTGAGGCATGATTGATTTTTTAAAAAGGATTCCCTCCAGAC
AGCTTAACTCCGTCAAGCCTGTACGAGTAAACAATAGATAAGGTTTGCTTGTTGGTTGTTGACCA
ACAGAAAGCATGGGATGCCCCACAACAAATAGATGGGAGCAGGAAATCTTTATCATTCGGCGTAG
TGCAGCTTATATAGAATAGAAGGGGCAAAGCGCTGTTCGTGGCACAGCTTTCTTATATTACGATA
TTTTCATTGATCGTAGCTAATTAGGTGGCAACAACCGAAGAAGCAGAAGAAGTAGCTGCTACCGC
TTCGTGGGCTTCTTCTTTTTCTGAGTCTGCTCGAAAGGTAACTCG
Right flanking sequence: Indices 88304 -- 88803
CCAGTAGCTTTGAGCTTTCACGTGCTCTTGTTCACAATCCAGTTGCTATTGAATCAGCGTAAGGA
GATGCCGATGAGGGTACAAGAAAAGAATGAGCTTTTGTTCAGAGCTTGAATCAGAATATCCTTCA
GTAACTCCAGGATTCCCCTGGTAGGGCATACAGGACATACCAGGTGAGAAGTTCGGGCGGAAAGA
TAGATCGAGTTTACTTTACCCTCTTGATTGACTTTCACTTTAGGACTGAAAGATAGCAAAGGAAA
TGGCAGCAGTGCTTTATATATTAGGTCTTCGTTGATCACTTCTGCTTAATTTAAGCACTTCTCTT
TCGAAACCTAGAAAGCGAGAAAGAGAAGAGTCAGTTCTTGTGAACGACTCCGATGCTCTTTCTAT
TTAAGAAGATGGAGGAATAAGCGATGCTGCTAAGATCCGCAGTCGATTTAGCTCTTGAGGGAAGG
GAAAGGCGGACTTTAATTTGATGGGCTTTTAGGACTGGCCCGGAG
Found at i:93887 original size:13 final size:13
Alignment explanation
Indices: 93869--93897 Score: 58
Period size: 13 Copynumber: 2.2 Consensus size: 13
93859 GGATGAGTAT
93869 AAGAATGAATTAC
1 AAGAATGAATTAC
93882 AAGAATGAATTAC
1 AAGAATGAATTAC
93895 AAG
1 AAG
93898 GGGTATAGAC
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 16 1.00
ACGTcount: A:0.55, C:0.07, G:0.17, T:0.21
Consensus pattern (13 bp):
AAGAATGAATTAC
Left flanking sequence: Indices 93369 -- 93868
CGCCTGACCCACTTTCCACTGTGAACCTGCGCCGACACAAGACACAACCGCAGCAGTTCGACGGA
GAGCATGGTTCCTCCTCCTCACGAAATGGATTTTCAGTTCTTTGCCTCGGGTCAGCGGATGGTCA
GGGGACAGGTAATTACATTAACTAACAAAGCGAAATGGATAGGGATAGCTCGCTTACTACCTTCT
GGTCTCATCCAGCGTCTACAAGCGGAGAATTAGTTATAGCGTAGGGGTGGAAAAGAGGAAGAGTG
CCCGCTAGAATCTTCTTTCACATCCATCTTTCTGCGTCAAAGCTTTATGTTTGCCGCCCATTCTT
ATTCATCATACGACACGAGAAAGACAAAACGAATATCACAAGTAGAGTGAAAAGCATAATCTAAC
CTAGATGGGAATCCGAAGACAAAAGTTGGAATCTAAATCCGTTGAAGACAAAGAATACTGCGTGG
AAGCCATTGGATTTTCAAGATGTAGATGCGAAACCGGATGAGTAT
Right flanking sequence: Indices 93898 -- 94397
GGGTATAGACGTATGACTAGACTATGTTTTATAAATTGATACAACTTCTGAATTGAAGGCTCTGG
CAAGAGTTCGTGAATAGTCGACGTAAACAGATAAGAAAGAAGGATTCTAATTCTAGGCCAACCGG
CCCTAACTGATAGGGGTATTGGTCTTCTTTACCAATGTTTGGTAAAAAAGTTATATTGTACCCGA
CCTGTTCGGATATGTGTTAGAGTCGATAGGAGGTTCCCTCCCGAACTCGATCAAAATAAGGACGG
ACGAATATGTTTTGTAAATCTCTCACTGGAGCATCCTCAGGAAAAGGTGTAAGTGAAGGAGTTGC
CCGATCCCGAAGAAATTCACATACTCTCTTTATCCTCAGAGTTCTTAATGGCTTTAGTAAGGAAA
GTCTTAAAACCAGCCTGCCGTTTGGTCTTGTTCTTCCCTCTATGCCAAGATAAATCGAAAGGAGA
AATCTTGAGATCCCCGGTAGCGGGAGGACCCATTAGAGCTGCAAG
Found at i:117839 original size:21 final size:21
Alignment explanation
Indices: 117815--117856 Score: 84
Period size: 21 Copynumber: 2.0 Consensus size: 21
117805 ACGAATCAAT
117815 TGATTTAATGTAGGCATCAGA
1 TGATTTAATGTAGGCATCAGA
117836 TGATTTAATGTAGGCATCAGA
1 TGATTTAATGTAGGCATCAGA
117857 AAATGGGCTT
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 21 1.00
ACGTcount: A:0.33, C:0.10, G:0.24, T:0.33
Consensus pattern (21 bp):
TGATTTAATGTAGGCATCAGA
Left flanking sequence: Indices 117315 -- 117814
AAAATCTCTGCTTGCTTCGAAGCACTTCTAGACCGCACAACTGCCGTCTACTCGAATCTACTCGG
AACTAGACTGCGCCGATCTGTCGATTCAATCTATGGCATTCTTCTTCTATACGATAGCTTACCCC
GTTTTCCATTCATATGGATTTGGGTTTTTCCGCACCATATTTAGATCTTCCTCTTCTTCGATCCG
GAATTCCCAGCAAATCCTTGACTCCTCGAATACAATGGGATTTCACACCTGGCGAATCTTTTACT
CTACCTCCTCTTATTAAGACCATAGAATGTTCCTGCAAATTATGACCTTCGCCTGGAATGTGAGC
AAATATATCATGTCGATTGCTCAACCGTACTTTGACTATCTTACGTAGAGCTGAATTAGGTTTTT
TAGGTGTTCTCGTTGAAACACGCAGGCATACTCCTTGCTTCTGGGGACATTGATCCAAAGCTCGA
GTACGGTCCGTGCGCCGTTTTTCTTCTCTACCATCACGAATCAAT
Right flanking sequence: Indices 117857 -- 118356
AAATGGGCTTTATTTAACGAATGTGCAACTATCAAAATTTAAACTAAGCGAATGTGCAACTATCA
AACCATCTGTTTTTCTATTCGGTCTGTCTTCAGCAGGCCAACTAATCTAAACTACTAATCTACAA
AACAACTATTAGAAAAGAAGTTCCTCCCCGCTTCCATAGCACATAGCTATTGATCTCCTTACCCC
AACCAGGTGCTACTCCGATCTCGCCGCCAGTAATGCTCGATTCCCACCTCCCGCCTCTCCATCCT
AGCTTCAGAAAGAATCTCACCCTTCTGCTGTCCCTGCCTCCAGCTCCAGGAACTCCTGCACCGTT
CTGCGCCTTTTTGAATGAAGCGCCTAGTTTCACCGCTTTCTTCTTACCCACGCGAGATTGGTATT
CAGTCTGCCAAAACGAAACTAAAAGAGGGGTCTTTCTAATTTCGTATATAAATGTAGATGTGGGT
TGTCGGGTTTGGATCGAAATAGAATCCCCAAAAACTGGGGCATCC
Found at i:122155 original size:15 final size:15
Alignment explanation
Indices: 122135--122165 Score: 53
Period size: 15 Copynumber: 2.0 Consensus size: 15
122125 ATAAAAAATA
122135 TAAAAAAGAAAAAGGC
1 TAAAAAA-AAAAAGGC
122151 TAAAAAAAAAAAGGC
1 TAAAAAAAAAAAGGC
122166 ACTCATCAGT
Statistics
Matches: 15, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
15 8 0.53
16 7 0.47
ACGTcount: A:0.71, C:0.06, G:0.16, T:0.06
Consensus pattern (15 bp):
TAAAAAAAAAAAGGC
Left flanking sequence: Indices 121635 -- 122134
AGGCTGGGCTGCGTACTTTTCGGCGCCCACCTTTTCTTTAGGTGTTGGGGCAAGCCCCAGGAAAG
TCTAGGTTGGCTCCCAGCTCCATCTCGGTCGGCATCCTGCTCTCGAGGGAATGGAGTCCTGGAGC
GAACTACTCATTGCTGTCTTGCCCAAGGAAGGGCATTTGGAACATTCTTTTTAGGGAGGGAAAAC
GTGGTTGACAAGCCACTTCGAGGAGGCGACTGGAGTGCTTTCATCAAATAATGCATGTGGGCTGA
GCCATTCCCATCCCGACGTGGTGGCCCGATTCGGCCTGGCCTGGTCGGGAAGAGATTCACATAGA
GACAGACTACTGTTATCTGGGAATATCTTTCTATGTTAGCTAGCGGGGGCGGGCTTTGCTTTCCT
ATGGTAGTCCCGCGGCGGCCTCTGACCGTCCGTCCCGTCTCATCTTGATTTGGCTATACTTGTAT
GTAGCCAGCCATGTTAGCTTCACATGAGAGCCTTTATAAAAAATA
Right flanking sequence: Indices 122166 -- 122665
ACTCATCAGTCGGCCCCTTTCCTATTCAGCCTTGCCACCTCTCCAGTTAAGAGAATAGGTCCCGC
GGCCGCCCGCCTGAATCTATACTAGCTGCCACGCACGACCCGAACGATTTCAGCGCCCCTCTCCA
GATAAGAAGCAAAGCGTGCCATCACCTACAGCCCTTTCCTCTGCCGGGGACTTCCATGAAATGAA
AACGGGCGGCATCGTCGTATGCTCGACATTTGTTGCCCTGGTTTATACCCCGGAGTACTCCTATG
GCCGATCTGTCACCCAACCTCCTTAAACAACCTAAAGGCTTGGCCCCGTTCCGTTTGGAGTTGGA
GAATGGGCCTTATGGCACGGCTTAGTCAGTTATTCTCGCAGATAAGATTCGGACCGCCACTTCTC
TGAAAGCATGGTTTTTGCCTCCCTCCTTGGAGTTCGTCCATTCGTTGGGCGATCCCTTGCTCTCA
CGTTCGAGTGTTTGCTCGTCGTTTAGGCCGGTGAGTGAGATTTCT
Found at i:165790 original size:76 final size:76
Alignment explanation
Indices: 165664--165816 Score: 306
Period size: 76 Copynumber: 2.0 Consensus size: 76
165654 AAAAGCCCGA
165664 CTTGGTTTAGCGGTTGCACCAAACCTCACTGTGGCTAGTGAGACAAAGTAGTAACGACCTGGCCC
1 CTTGGTTTAGCGGTTGCACCAAACCTCACTGTGGCTAGTGAGACAAAGTAGTAACGACCTGGCCC
165729 CTCCCTTCCTT
66 CTCCCTTCCTT
165740 CTTGGTTTAGCGGTTGCACCAAACCTCACTGTGGCTAGTGAGACAAAGTAGTAACGACCTGGCCC
1 CTTGGTTTAGCGGTTGCACCAAACCTCACTGTGGCTAGTGAGACAAAGTAGTAACGACCTGGCCC
165805 CTCCCTTCCTT
66 CTCCCTTCCTT
165816 C
1 C
165817 CTTCCTGTGG
Statistics
Matches: 77, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
76 77 1.00
ACGTcount: A:0.21, C:0.31, G:0.22, T:0.26
Consensus pattern (76 bp):
CTTGGTTTAGCGGTTGCACCAAACCTCACTGTGGCTAGTGAGACAAAGTAGTAACGACCTGGCCC
CTCCCTTCCTT
Left flanking sequence: Indices 165164 -- 165663
AGGCTAGGGTTTTCTGAAACATTCCAAGATCGAAGAAACCGTCGCCAGAGACAGGACTCGGGAAG
CCATTCGTCCTTGTTTAATAAGATCGGATTAGAGTATGCCACTAGCTACTTACAAGTAGTCCATC
GATCGGTAGGCCCTGACTCCTTTCCGGTGGAAGAAAAGAGCCCTTCCTTATATAAATATAAAGAT
ATAAAGAATATAGGTTAAGGCGATCTTCTTTGAACTCAAAAAAAATTTCACTTTCTGTGAGTGAA
TCCTATCTTCCGAAATTGCGTAGAGAAAGGAAAGGAACCTGCGCTGTCGCTTGAGGTGGTATCAC
TGGCCCACGTCTACACGCAGTTCAAAGCTGGCTCCAGAAGAGGTTGGTCCAACAGCTCCGTGGCT
CGAGGCAAAGGTAACCGCTACCCGTCTCTGGCCCTAGCTCGCAGCTCCATTGAGCACTGAACAAA
GACACATACATCGAGCACAGCGCACAGACTGGGTTAAAAGCCCGA
Right flanking sequence: Indices 165817 -- 166316
CTTCCTGTGGGGGACCATTACGTTCCCTGAGTAGGACGAAATTCACAGCGCTCTGACCTGTCTCA
AGGTAAGACTGCAGCAACTTTTGTTGACAGGGTAAACACGAAAGTGGGAGCGGGTTGAGTCCAGA
CAACCGTAGTAAGATGACGGCGTCGAAAAGGAGACAACCGATGTCAGAGGCCTAAATCTCTGGGC
TGTTCGGATCACCGAGGTTATTCAAACGAAGAGTAGATCAGTCTAGCCAACTGAGGATTTGGTTT
TTGTGAAACACGGAGAAAGAAGTCATGTCTCCGCCGGTTCCTGCGCTTCAATACATTGGGCTTTC
GTACTGGATTTTCTTTCTGGTGCAGTTCTATCCGCTGCTTTCTTATCTTCTTTGGCCGCAGGTGC
GAGGGAAGGGGCTGATATGGTTTCCAATCCCGATGAGAGAGATGACTGGTGTTATATATTATATA
CCCCTATCTCTTATTCTTAATAACCCATTCTGTTGACTATATACA
Found at i:188757 original size:28 final size:28
Alignment explanation
Indices: 188717--188774 Score: 116
Period size: 28 Copynumber: 2.1 Consensus size: 28
188707 AACTTTTCAA
188717 TATAAAGAAAGACCTTGTACATCTGTCC
1 TATAAAGAAAGACCTTGTACATCTGTCC
188745 TATAAAGAAAGACCTTGTACATCTGTCC
1 TATAAAGAAAGACCTTGTACATCTGTCC
188773 TA
1 TA
188775 ACTTTGATAA
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
28 30 1.00
ACGTcount: A:0.36, C:0.21, G:0.14, T:0.29
Consensus pattern (28 bp):
TATAAAGAAAGACCTTGTACATCTGTCC
Left flanking sequence: Indices 188217 -- 188716
GTAAGCAAGTGGGATAGCTGAAAGCTTTTGATATGGATCTTAAGTAAGCACAAACCTGTGATAAA
GGTAGTTTCCCCCTCTTGGCATTGTAGGAGTCATTCCAGTAGTTTCATTCCAAGCATAAAAAGTA
CCCGCATTGAATTCGCCTTCGTGGCAGTCTCTTAGGCGTCAGATTTTAGGCAAGCAGAAGGATCA
GATAAGACATAGATTTATTTTAGTGGGAGTTATCCATCTAGGTCAAGCGCTAATATATACATTGA
TTTCCTTTAGAGTTGAGAGTCAAATAGCTAGAAGAAGGCTAGGAAGGTGGAAGAGAAATTACCTA
TAATAAGAAAGAGAATCCAATTTTCTAATATGAATTTGAATGGATTCTCCACTAACTGGAAAACC
TGCCAATCCACTCTTCCTTTTTGGTCTGCCACTACTGTCTTACTGAAGCTGGCTTGCCTTGCGTA
GATCAAAAACTTTTCAAACTCTGGCTTACTAATAGAACTTTTCAA
Right flanking sequence: Indices 188775 -- 189274
ACTTTGATAACACTGGAATACATACTTTACTTCCGCGGGTATTGGCTTTCGGGCTTGATGAGCTC
CACCTTAAAGAGAAAAAAAATGGGCCTACTGCATGGGTTAATGTTGATAGGATCTGGGAGATTGG
AAAAGACATCCCGGTAAATGTATTTCTTTTAATAAAGGAAAGCTTCCACGTCACATCCGATAGTC
TGATTGGACTTCTGCTGGAACTGGCTGGTCACACTCGGTAAGACTTTTTTTATCCTGTAAGACTG
GCTTTTAATAGAACCCCTAACATCTCTAAGAAAGCATCGACCCTCGCTGATGCTCGTACATACTT
TGATTTCCGACTAAATAAAAGAGGCTTTCTTTGCAGCATCCGTCTTGCAAGCAACCTATCCCCCT
ATATTAGATTAATCGGGTTACAAAAACTCTAACGGATATAGAGCCAACGGACGCTATGGATTTGT
TGTACCATTTTACGTGCTTGAACTCAGAACACACGCCATCCGATC
Found at i:238562 original size:25 final size:25
Alignment explanation
Indices: 238517--238564 Score: 69
Period size: 25 Copynumber: 1.9 Consensus size: 25
238507 GAAGCGAGAC
*
238517 TCGACTGTTAAGGACCCAGAGGGGA
1 TCGACTGTTAAGGACACAGAGGGGA
* *
238542 TCGACTGTTAAGGAGAGAGAGGG
1 TCGACTGTTAAGGACACAGAGGG
238565 AAGCACAAGG
Statistics
Matches: 20, Mismatches: 3, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
25 20 1.00
ACGTcount: A:0.29, C:0.15, G:0.40, T:0.17
Consensus pattern (25 bp):
TCGACTGTTAAGGACACAGAGGGGA
Left flanking sequence: Indices 238017 -- 238516
CTACTTTAGCCGCATTCGCTGCATCTGAAGGGACGATTTCAGATAGGTAGGTTGGGTTGCTCGTT
GTGGTTGCCCGGACCTCGATCTAGATCCAAGATAAACCAAAAGCATGGGTCGTGGTCGGCAGATA
TATATGATTCTGCCGGGGCTTGGGCTTGACTTCTTTCTTCATGAATGATTTTGGAGAAGCCTGCC
TCGAGAGAGACATATGGCATATCTGACTGCCTGATTGGCGAGCAGCTGTCCTCATTCATAAGTCC
AAAGAACTAGCAACCAAACTGGTCGCAAGCAGGAGAGTGACCAGGCCTGATACTGATTGAAACGT
TTATTTAATTGGAAGCCGTTCAGATAGCCCTAATTAGTTTAGTCAATGTTGAGCTGTCATATCTA
GCTGCCATATATGTAAACATGCCCTAAAAGTAAAGGGATCATATTTCCTTTAGTAACCACTTTTA
CCCATCCGCTCTTCTCCTGACCGATTGGAGGAAGAGAAGCGAGAC
Right flanking sequence: Indices 238565 -- 239064
AAGCACAAGGTTGGTGACCCGGGGGAAAGCGAATGCAGATCTCACGCAAAGTGAAATCTCAAGAT
TCAGATTGGGTTTGTGTTCGGTGTGGAGTAGATAGGGCTATTCCTTAGCAAGGCTATTCAGTAAA
GGCGAGAAGGGATCTATAGCAAGGGCAGCCCGGGTCTACCCGCAGAGTTGAGGAAGATAGATCAA
ACAGCCTTAGCGCTTTAGCTTGAACTGTAACCTTACCCTCGCTACTGACCTGTCGCTTGGCCCGA
AAGACTGGAACTAGAAGTCAACTGTGCCTAGACCTCAATCAATACGCTTACTGAGAGTACCGGTA
CCAGAACAAGAACAAGGATTTCTCTTTGGTCAAAGCCGCCGCACTTGAACCGTAACCAGCTAATG
CATCGCCTTCTATCTGCATTTCTAAGACCAGTCCCTTATTCTGCTAACCAATTAGGTTGGTTCAT
CAGGTGCCAAGGCATCTCTTTCTCCCAGGTCCCATCTCGAACATT
Found at i:240426 original size:22 final size:22
Alignment explanation
Indices: 240400--240444 Score: 90
Period size: 22 Copynumber: 2.0 Consensus size: 22
240390 TAGTGGAGCC
240400 TTCGTGTACCAATTTCAGTGGT
1 TTCGTGTACCAATTTCAGTGGT
240422 TTCGTGTACCAATTTCAGTGGT
1 TTCGTGTACCAATTTCAGTGGT
240444 T
1 T
240445 GAGTTTCGCA
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
22 23 1.00
ACGTcount: A:0.18, C:0.18, G:0.22, T:0.42
Consensus pattern (22 bp):
TTCGTGTACCAATTTCAGTGGT
Left flanking sequence: Indices 239900 -- 240399
AATCACTCCGTTGGGACGGGAACATGTATCCCTCCCAACCAAAAATCTTTTTGTCTAAATCAGCT
TTCGGCCTATCGATTTAACCGGGAGCTGCTGTTGAGCACTCTCACCGGATTCCCTATGCGCTGAT
TGATGCTTCCTCTCCGACTCGATGAGACCACACTACTGAGTGAGCTTCTTTCTGGCGCTCTTCCT
AGGATTCCTAATGCCTCTTGCTTCAACACAGAATAAGGTCTTTTCTCGGCCACTTTGTCATGAAA
TGAAAGCACAGTGAGTGAGTCTTCTTTCCGAGTCGAGTACTAGGCAGTCAATGTAGAGTTCACTT
CATTTGTCAGACTCCCGGTACCGAAGCAAAGTACTCATCCGAAAAGACGGTTTGATCATGCCCTT
TGTCCTCAACCCATGGTTCTCCTATATCTCCTAACTTTCGCTTTGCTTTCTCTTGAGCCCGCATT
TCGTGTTTTTTAAGATATTAAGAGGTGAACCCGCATAGTGGAGCC
Right flanking sequence: Indices 240445 -- 240944
GAGTTTCGCACTCCCGTCATCTTCCTCTTCTTTTTGGAAAATCCCAAATAGTCATCAGAAACAAG
CTAGCCGAGCATTGATTTGGGTGTGGGTGGGGTATGGTGCCCCAACGGATGGATCTCCATCAACA
TGGGATTTTTCCGAGGGGATCAATGTCTGGTCGAACCAAGCTTCCTTCTCTCTCTCTTGCTTCCC
CACCTGTGACTGAAGCTTCCACATGAACTTGACTTTCCTATCTGAGTAGACCGAAAGTTCTACTT
TTTGGGAGGGACATTAAAAAGGTAGCTTTCTCCCTGGTCGATCAGTCGTTCAATCCTTTCCTCTT
GATCAAATGCATTTCTAAAAGATTCTCACAACACAATGGACTCCAATACTGAACTGAGACGGACC
CAGACCCCCTACCGAAAGGGCTCTGTACCTATATGTTCTTTATCTCAAGCGATAGCTTTCAAGTG
CCCGACCCTCTTCCCTTGATCAATGAGTGAGAAAGCAATAGCCAG
Found at i:272245 original size:14 final size:14
Alignment explanation
Indices: 272226--272254 Score: 58
Period size: 14 Copynumber: 2.1 Consensus size: 14
272216 GGCTTACTGT
272226 TTAGGTAGGATAGA
1 TTAGGTAGGATAGA
272240 TTAGGTAGGATAGA
1 TTAGGTAGGATAGA
272254 T
1 T
272255 GGATGTAGTC
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 15 1.00
ACGTcount: A:0.34, C:0.00, G:0.34, T:0.31
Consensus pattern (14 bp):
TTAGGTAGGATAGA
Left flanking sequence: Indices 271726 -- 272225
GCAAGGACCCGCAACTCTCGAAGGGGCCACCCACCGCCCGATGTAGCGATGTAGCAAATCCTCCC
TTTACTCAATGTACCGCGCTTAGCCTCTTTCAATCAAGGGAAAAAAAAAGAGTGACGAACCCGGT
CATAGGTTGGTCCAAAGAACGAGAGTCGGCTTCCTTAAGGGAGTTCTTCCTCAGTAGCTCAGTGG
TAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCAAATCCTACTTGGGGAGAATTTTGAGTT
ATCGCTTTTCTGACGCCTGTTTTTCTCTTTAGTTTCTAAACTAGCAGAATCGTGGGACATCAAAA
GTGGGAAGTTGATTGTAGGGTTTTATTCTTCACTCTCGTATAGGTGAACTTGGTTCGTTCAATTC
TTAGGGAAAAGGAAGGATCCACTGTGAATGAATGGGAAGACTGGAGTAGTATCTTCATTAGCCGG
AAGGACTCCACTAGCTCGAAGAACGAACAAGAAAAGGCTTACTGT
Right flanking sequence: Indices 272255 -- 272754
GGATGTAGTCCAATGGCTAAAGCTCTGCCAGCTTCTTGTAGACTGAACTCTCTTCTCTTTAGGTT
CCGAGTTGCTTTTTTTGGGGTAAGATTTTTCTTCGCCACTAGTACCAACGAAGTTCTTGGTTATT
TGAAAGGAGGAAGGAAGATCTCCACTCATTTCATTCATTCAGTGCCTACGGCGAGGCGCGACCCA
CAACAAACAAAGGCAACTTCGTTGCTTGCTGTAGCCCTCTTTTAGTAGACTAGGCTGAGTAAGCG
TAAGCTATTTAAGTAGGCAGGGTAGGCTCGCAGCTTCGCCAGAAGCGACTAGTCGCCTCCTTTCC
TCCGCCGAAAGATGCTTAGCCAGAAGCGACGAAGGGGGGGCGTCGGGAAGGCCGACGACTACATG
ACATGAGGGAGAAGCTGTCGTAGAAGCTTTGCCCCTTGCTTTACAGAGATTGTTATGAACTGACT
AAATGACTAGATTCTCCCGGCTAAGCTAATAAATAGTATTTGTTC
Found at i:289821 original size:18 final size:18
Alignment explanation
Indices: 289798--289834 Score: 74
Period size: 18 Copynumber: 2.1 Consensus size: 18
289788 ATTTAACAAC
289798 AACATTATAAGAAAAGAT
1 AACATTATAAGAAAAGAT
289816 AACATTATAAGAAAAGAT
1 AACATTATAAGAAAAGAT
289834 A
1 A
289835 TTAATAGATA
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
18 19 1.00
ACGTcount: A:0.62, C:0.05, G:0.11, T:0.22
Consensus pattern (18 bp):
AACATTATAAGAAAAGAT
Left flanking sequence: Indices 289298 -- 289797
TAACGCAATTCCGGGAGGAGTCGGTAATTGGGCACTGGATCCCTTCGGACCTGGAAAACGTGTAA
CGCTGGGTCGGGGTTTGGTGAACCAACTGGTCGCTCTTCTAGTTGAAGTATCGGGCCCCTTTTTC
GTTGTCTAGGTTACACCTTCGGAATACCCCAGAAAGGGAATTCTTCTCTACTTCCCGTGATCTTC
ACTTTACGCCACACCGACTCCCTTTTCGAAACGTCATAAGGCGTGGAATTAGACCAAGGGGAATC
TCCATAGGAACTAGTCCCTCAGATTTCGCACGTAGGAGATCGAGACACAGCCCCAGGGCTATGGG
GAAAGATGTAGATCGATCGCCCTAGATAGACAACTACATAGAGGGTCTCTACAAGTCTATATATT
CTTAGATTTCGTTCCCCCCGTGACGATCAATATCACAACCAATGAGGTCTGCAAGTTTCACATCT
AAGTAATACCCGATCCGGTAGTTTACGATATAGATATTTAACAAC
Right flanking sequence: Indices 289835 -- 290334
TTAATAGATATCGGTAGTTGTCCGGTCGTACCCAAACAATAAGATTCCAGAGGGAAATGCACCTA
AGATCAAATATTTCGAGCCGGCTTCCGTGGAAAATTCAGACTTTCTTTTTGATGCTGCGATCACA
TAAAAACATAAACTTTGAGGCTCAATAGCTAAATACATGGCAATTGAATCATGAGCCGAGATCAT
AAAGAGCATACTGCGAGTAGGAAGTAGAATTAATACAATGAATTCAAAAGCATCAAACCTCTCTT
GTTCGGAAGAATCGAAACACATCGAAATGGTACCAGCCGTACTTAATAATAGAAGGATTTGGCAG
AAATATGTAAAATTGTCCCTCCTAAAAAAATTATTCCAGAATAAATGGGCAATAGTTAGGAGAGG
TGCGCCAGCGGCGAGCAGAAGCAAGGTTATTAGATACCTCAGGAAAGCCCGGCCAGAACCACACG
TGCAAGTTTCCCTGCATGTGGCTCGTCCGTGATAACTTCTTCGGA
Found at i:372786 original size:13 final size:13
Alignment explanation
Indices: 372768--372793 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
372758 TTGCTGCATT
372768 ATTCATAAACTAA
1 ATTCATAAACTAA
372781 ATTCATAAACTAA
1 ATTCATAAACTAA
372794 GCTCGCAGGA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.54, C:0.15, G:0.00, T:0.31
Consensus pattern (13 bp):
ATTCATAAACTAA
Left flanking sequence: Indices 372268 -- 372767
GTTCCATAGGCTGCCCCTTGAGGGCGCATTAATGAGTCGATGCTGTTACGGCTTTACGAGGTGGA
GATATAACGGATTGAATTCCTTTGGATTGATGTAGCTTTCATTCTGAGGTAGCTCTTTCGAGAGC
TTACTTGGCAGCTTGTGTGTAATCGAATTCGAGGGTCTGATCTTACTATTTCCTTGCGTTAAGGA
CTACCGGAACGGAAGTTTCGCAAACTCCATTGCTTGAGCGAACCACTATGCTTGGCTGCTTATGG
CGCTTAAAAAGTAGAATAATGGAGGCAGTTGGAATGGCCAGAAAGCTTGAACCGCTCCTTATCAG
TCGCTCCTTGTTGTCTTTGTTCGTTCTTCGGGCTAGAAAAAATCCCAGTTTCGCACTAAGCCCAA
GTAGAGCTAACGAGAGTCGCCTTGGTCCATGAAGGAAAAGCTCAAGCTCTATCTCCTTGCTCTGG
TAGCTCAAAGCCCACCGGTACTGTCGACCCTACGATTGCTGCATT
Right flanking sequence: Indices 372794 -- 373293
GCTCGCAGGATCTAAAGTGGAGTCTCGCTACATGATATGGAAATATCAATGGAAAAAGTCTCGCT
CGCTTAGACAGGAGCGATATAGGCAGGTGTTGTCTTGTTATCTTTTCACCTATCTAACTCCGGTT
CGATGGGTTCGGGTGGCCTAACGAGATTAGCATTGCAGGTCTTTTTCATATGAACGGGAAAGAAG
AGAACCTCGATCGGGCCTGAGAAAATGGTAGCCCCGATGGGAAGCCCCATATGGAATGCTCTCTG
TACTCTCTTTTCCATCATTCCAAGTGGTCCAGCGGTCGCAAGCAGGGGAATGGCTTTCCGGCTAG
TCTTTTTATCCTCAAAGCCCTATTCAAAAGCTCCGGTCTAGTCTGATAGTGGTAAAGTGGAAAAT
TACGTGAATTACGTGAAGTAGTATACCACTATGTGGTCATCTTAGTCGGCTAAGAGCCATTGCTT
TCATAAACGTGATTTCAATCGTACGTCTCGTCTCCGTCTATTCTT
Found at i:472906 original size:24 final size:24
Alignment explanation
Indices: 472879--472926 Score: 69
Period size: 24 Copynumber: 2.0 Consensus size: 24
472869 AACTTGCAAA
*
472879 CATAACCAGGCAGTGAGGTATCTT
1 CATAACCAGGCAGTGAGGAATCTT
* *
472903 CATACCCAGGCGGTGAGGAATCTT
1 CATAACCAGGCAGTGAGGAATCTT
472927 AAGGGGAGGG
Statistics
Matches: 21, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
24 21 1.00
ACGTcount: A:0.27, C:0.23, G:0.27, T:0.23
Consensus pattern (24 bp):
CATAACCAGGCAGTGAGGAATCTT
Left flanking sequence: Indices 472379 -- 472878
GGCCAAATCAGGTCTTGTAATATACTGCAGGGCTCCAACGATGCTTCTGTACAGAGATGGATTAT
GAAATGGAGTAGAAGAGACTGCAGCAGAGGACTGATTTTAAAGTTAATTGGAGAAGAGCAGGGCT
TACAATTCAGCATAGCAGCTCTCTGGAGGAGATCCAACGCATATTTTTGCTGTGTTAAAAAAAGT
CCACGATCATTCTTGTCTTGAGTACCTCAATGCCAAGAAAATAGTTCAAGTTCCCGAGGTTCTTT
ATAGCGGAGCACTTAATTCAGTGATTAGAGTGGAGATATAAGAGGTATCACTGCCAGTTATAATA
ATATCATCCACATAAACCGCAAGAATTGTAGTTCGCAAACTGTTAGTTTGAATAAATAACGAGGA
ATCACTACGGCTCATAAGAAAGCCTTTACTGATTAAAAAGCTATAAAACTTATCATACCAAGCGC
GTGATGCCTGTTTAAGACCATACAATGCTTTCTGCAACTTGCAAA
Right flanking sequence: Indices 472927 -- 473426
AAGGGGAGGGGTTGGTAGTGAAGGGAAGTCCAGGGCTGTGTCTGATCAGCTTACTGGGAGAATTC
CAGGCGAGGGAGTATTGGTAAGGTTATGGAGGAAAGAGGAAATAGGATTTTGGGCATCTCTCGTT
GCTTCGGATGTTTATGAGAAAGAAGCTTCTCACAGATATTGACTTTTAGATAGATACCAGCATCG
TATCTTAATTAGCAGTTTCTTGAACTTGGTTGCACTCGTAAAGCAGCTTAAGAGAGCAACGAAAG
ACGGAGCGGTGATATTTCATGACTAGCAAGTGGAGGATCATTCCAGGCTCTAATTCAGTCTCTGA
TGGCGTAGCTGATGTGTCATGCTAGGAAGCTGAGCTAGGGCATTTCTTCTTTCGGTTTAAGTGTT
GTGAAAACCCTCCTCTCCGCTTCTGGCAGCATAGAAGGAAGCTTGGGGGAAAGGTCTAAGTGCAA
GCATTGAGTCAAACTGATTCAGGTATAGCAATGTAGTTCTTGTCT
Found at i:500206 original size:17 final size:17
Alignment explanation
Indices: 500184--500217 Score: 68
Period size: 17 Copynumber: 2.0 Consensus size: 17
500174 TGGTCCCTTA
500184 TGAAATGACTTTTCTCG
1 TGAAATGACTTTTCTCG
500201 TGAAATGACTTTTCTCG
1 TGAAATGACTTTTCTCG
500218 ATCAAAATGG
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
17 17 1.00
ACGTcount: A:0.24, C:0.18, G:0.18, T:0.41
Consensus pattern (17 bp):
TGAAATGACTTTTCTCG
Left flanking sequence: Indices 499684 -- 500183
AGCTCGCTTGTTTCCTTCTTTCGTAAGGTTTCCGTCTTAGTAGGAACTCCCCTAGTAGCTTCTAT
TCCCCCTACCCAGTAAGTCTTCCTTTACTGTTAGCTCCTTATCTAAGGGGTAAGCCCCTGTAACT
ACTAACAAGAGAAGGTCGCTGCTGATGTCCCCCACCCACCCATTAATGAAGAAGTGGGCTACTTC
TGACCAACATCCATTCTCAAAGATGGAAGTGTTGAAAGTCCTATTAGGACCTCCAATAGCCGAAG
AGTTGAGTTCCTTCTATACAGATGCAGTTTCGTTTCCTGCTGCTTTAGTTAGGTCGTCTGTAACT
CCCGACTGAGTTCATTATGTACGCTGTCCCTTATCAGTACCACCCCATCGATAACATGCCTTGAT
TGTTCCCTTTCGTTCCCAGGCACACGCGCTGGATGCGGACATTGAATGTCCTCACCGATCAACCG
CTCATGAATGAACACCAAACAACCAAGCTTTTGACTGGTCCCTTA
Right flanking sequence: Indices 500218 -- 500717
ATCAAAATGGCAGGAATTGGGTCCTGACATGTGCCTACTGAAATACCTAGAAAGCATTCCTTCAC
TTTCCTTATAAGGGGCGCTGCCTGATTTGCATGAATGCCGAACCCCAATAAATGAGTATTGGTTC
ACGTCTTAATCATCCCATTGTTTTCAAATAGACATGCCATATTGGCTTTCTCCGAGGCCATAAGA
AGGTAGTTGCTTAGGGACCATACAAGTAGCGAATAAGGGAGTTGCTGTTGCCGCTCATACAGGAG
GGCGGATGTAACTAATGAATAGAGAAGGGGGTATCCCTGTGTCCCCCAACTGTTAGCAAAGATGG
ACCCGTACCAACTTCAATAGTCTCGGATATGCCCCCTAAGCTGTAACCACTGCGTGAAGGCCTTT
TTCAAGTAAACAGTCAACAAGTAAGTCGGCTGTTTCCGGCCGAAAGCTACATCGCAGTAATGAAT
ACAACCAATTAAGTCGGTAGCACCTAGAGCGTCGAAGCCTTTAAG
Done.