Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_058584
Parameters: 2 7 7 80 10 50 500
Length:  281175

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17975--18001
14
1.9
14
100
0
54
3
14
0
81
0.82
23628--23706
39
2.0
39
95
0
140
31
17
27
22
1.97
33286--33332
1
47.0
1
91
0
76
4
0
0
95
0.25
35988--36036
5
9.6
5
78
12
55
81
0
16
2
0.78
35982--36027
15
3.1
15
81
9
51
82
0
13
4
0.81
35985--36032
19
2.7
17
84
15
62
83
0
14
2
0.74
35985--36036
13
3.8
14
75
10
54
82
0
15
1
0.75
36038--36083
24
1.9
24
86
0
65
23
19
30
26
1.98
47598--47637
16
2.6
16
92
4
64
40
27
27
5
1.77
52068--52114
21
2.2
21
96
0
85
31
25
40
2
1.68
54614--54739
45
2.8
45
91
0
189
24
23
18
33
1.97
55445--55524
31
2.6
31
75
0
79
35
13
25
26
1.93
106169--106202
18
1.9
17
88
5
50
14
20
29
35
1.93
116543--116585
18
2.4
18
81
18
54
18
20
25
34
1.96
118195--118238
21
2.1
21
95
0
79
29
18
13
38
1.89
144494--144527
17
2.0
17
100
0
68
23
23
11
41
1.87
145947--146010
25
2.6
25
100
0
128
53
4
10
31
1.57
153537--153576
20
2.0
20
100
0
80
30
10
15
45
1.78
161466--161517
27
1.9
27
92
0
86
36
7
21
34
1.82
170386--170426
18
2.3
18
82
0
55
26
17
19
36
1.94
195235--195291
22
2.5
22
97
2
105
15
33
29
21
1.94
206817--206842
7
3.7
7
100
0
52
88
11
0
0
0.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
206818--206867
21
2.4
21
83
3
57
84
6
8
2
0.86
206839--206868
15
2.0
15
93
0
51
80
0
16
3
0.85
219360--219407
24
2.0
24
100
0
96
25
16
25
33
1.96
220205--220251
20
2.3
20
92
0
76
27
14
29
27
1.96
226593--226627
18
1.9
18
94
0
61
20
25
11
42
1.85
227629--227674
21
2.2
21
100
0
92
30
17
15
36
1.91
236788--236827
7
5.7
7
96
0
71
87
10
2
0
0.63
241601--241636
7
5.4
7
93
6
58
0
13
0
86
0.58
241588--241636
19
2.6
19
90
6
73
0
18
0
81
0.69
253900--253924
12
2.1
12
100
0
50
32
24
8
36
1.84

Tables:   1

The End!