Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_053538
Parameters: 2 7 7 80 10 50 500
Length:  186911

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6303--6333
14
2.2
14
94
0
53
77
12
6
3
1.08
6392--6427
18
2.0
18
88
0
54
33
16
11
38
1.84
14546--14725
60
3.0
60
90
3
283
35
8
11
45
1.70
14546--14758
58
3.7
58
88
5
283
33
9
12
44
1.74
14546--14758
118
1.9
117
83
9
287
33
9
12
44
1.74
18787--18817
14
2.2
14
94
0
53
64
12
16
6
1.47
18787--18848
11
5.5
11
75
13
56
67
14
11
6
1.40
29224--29254
13
2.4
13
100
0
62
12
16
6
64
1.47
44429--44581
76
2.0
76
92
2
254
32
12
4
50
1.60
44435--44604
76
2.2
75
83
6
182
34
12
5
47
1.64
49166--49220
26
2.1
26
82
0
65
10
45
30
12
1.77
69521--69576
27
2.1
27
89
0
85
48
14
10
26
1.76
85576--86065
242
2.0
242
100
0
980
27
21
18
31
1.97
97808--97850
21
2.0
22
86
4
61
41
4
11
41
1.62
98677--98708
15
2.1
15
100
0
64
34
18
18
28
1.95
100477--100523
2
23.5
2
86
0
67
46
4
2
46
1.34
127470--127497
14
2.0
14
100
0
56
35
7
35
21
1.81
127641--127698
28
2.1
28
100
0
116
15
34
27
22
1.94
127902--127944
22
2.0
22
82
13
54
60
25
4
9
1.47
165233--165279
24
1.9
25
91
4
78
19
29
36
14
1.92
168205--168248
18
2.4
18
81
7
54
40
22
31
4
1.74
169157--169199
21
2.1
21
86
4
61
34
4
0
60
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
171852--171888
17
2.2
17
100
0
74
29
10
5
54
1.57
178516--178557
22
1.9
22
90
9
68
4
19
9
66
1.38
182335--182387
26
2.0
26
100
0
106
43
7
18
30
1.78

Tables:   1

The End!