Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_045036
Parameters: 2 7 7 80 10 50 500
Length:  779106

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38819--38844
13
2.0
13
100
0
52
23
30
0
46
1.53
88922--89050
65
2.0
65
100
0
258
24
23
15
36
1.94
93252--93287
18
2.0
18
94
0
63
25
16
30
27
1.97
93242--93287
24
1.9
24
86
8
67
26
19
30
23
1.98
116176--116211
18
2.0
18
88
0
54
30
13
13
41
1.84
122720--122757
12
3.2
12
84
0
58
23
10
0
65
1.23
123454--123481
14
2.0
14
100
0
56
35
14
14
35
1.86
124473--124553
41
2.0
42
90
2
128
28
29
28
13
1.94
176234--176259
6
4.3
6
100
0
52
50
0
30
19
1.48
221519--221574
29
2.0
29
96
3
105
33
26
25
14
1.94
245415--245474
29
2.1
29
90
0
93
15
38
13
33
1.86
256931--256971
21
2.0
21
95
0
73
12
26
24
36
1.91
271797--271834
19
2.0
19
100
0
76
63
10
10
15
1.52
280660--280791
66
2.0
66
100
0
264
30
22
12
34
1.91
282176--282211
18
2.0
18
94
0
63
22
8
13
55
1.65
283000--283041
21
2.0
22
85
4
59
73
2
11
11
1.18
299297--299336
21
1.9
21
89
0
62
37
22
22
17
1.94
339761--339892
65
2.0
65
100
0
264
30
18
22
28
1.97
422365--422436
2
37.0
2
84
5
94
48
1
1
48
1.18
461657--461693
2
19.5
2
86
10
51
48
0
2
48
1.15
490463--490503
20
2.0
20
100
0
82
51
14
14
19
1.77
492099--492141
15
2.9
15
85
0
50
72
6
4
16
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
492743--492774
16
2.0
16
100
0
64
37
0
25
37
1.56
519434--519473
16
2.6
16
88
7
57
30
17
40
12
1.86
525401--525471
33
2.2
33
94
2
126
39
14
18
28
1.89
525479--525607
65
2.0
65
100
0
258
46
24
9
20
1.79
528824--528871
24
2.0
24
100
0
96
54
12
4
29
1.56
530018--530069
21
2.5
21
80
0
68
9
23
17
50
1.75
532819--532854
15
2.4
15
95
0
63
22
19
5
52
1.66
539376--539416
2
21.0
2
92
5
66
51
2
0
46
1.14
539377--539421
21
2.1
21
100
0
90
53
4
0
42
1.21
542500--542601
51
2.0
51
100
0
204
39
17
19
23
1.92
544367--544391
13
1.9
13
100
0
50
16
16
28
40
1.89
592157--592236
31
2.6
31
85
0
115
30
16
28
25
1.96
605817--605888
38
1.9
37
94
2
126
20
25
22
31
1.98
648997--649029
16
2.1
16
100
0
66
54
15
12
18
1.71
665166--665196
14
2.2
14
94
0
53
12
25
12
48
1.77
667407--667439
12
2.8
12
86
13
50
42
21
12
24
1.86
686711--686737
2
13.5
2
100
0
54
51
0
0
48
1.00
688694--688767
29
2.6
29
97
2
141
16
28
12
43
1.83
690170--690204
3
12.0
3
87
6
54
2
31
0
65
1.07
725152--725176
12
2.1
12
100
0
50
32
0
32
36
1.58
726361--726403
22
1.9
22
90
4
68
39
16
11
32
1.84
750058--750129
38
1.9
37
94
2
126
20
25
22
31
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
759666--759709
21
2.1
21
95
0
79
43
4
4
47
1.44
776663--776895
119
2.0
119
100
0
466
48
8
15
27
1.73
776969--777000
14
2.4
13
94
5
55
37
12
6
43
1.68
776994--777018
13
1.9
13
100
0
50
40
8
12
40
1.72

Tables:   1

The End!