Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_039738
Parameters: 2 7 7 80 10 50 500
Length:  722009

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2861--2942
28
2.9
29
71
18
82
32
17
34
15
1.91
87199--87232
17
2.0
17
100
0
68
47
17
29
5
1.71
87234--87391
51
3.2
51
94
3
270
12
31
25
30
1.92
87316--87391
27
3.1
27
67
25
85
13
31
23
31
1.93
102047--102091
23
2.0
24
82
8
58
13
33
17
35
1.89
102240--102264
12
2.1
12
100
0
50
52
8
16
24
1.70
113916--113940
12
2.1
12
100
0
50
16
40
20
24
1.91
121359--121492
51
2.8
49
82
6
159
33
28
31
6
1.83
160682--160767
44
2.0
44
100
0
172
6
29
27
36
1.83
213061--213154
28
3.3
28
71
20
79
17
35
14
32
1.90
225499--225573
20
3.4
20
70
22
69
17
33
24
25
1.96
225516--225592
20
3.2
26
68
24
85
12
31
23
32
1.92
225500--225593
47
2.0
47
100
0
188
14
31
23
29
1.95
319238--319309
20
3.2
21
68
24
65
29
23
31
15
1.95
319210--319409
51
4.0
51
90
5
327
30
28
31
10
1.90
382740--382892
51
3.0
51
97
0
279
30
29
31
9
1.88
494935--494964
15
2.0
15
93
0
51
33
23
16
26
1.96
506613--506655
18
2.4
18
81
18
54
18
20
25
34
1.96
518971--519033
29
2.2
29
94
0
108
36
26
11
25
1.90
526453--526482
15
2.0
15
93
0
51
20
23
20
36
1.95
528207--528270
24
2.7
24
77
0
74
25
29
14
31
1.94
546943--547017
20
3.4
20
70
22
69
17
33
24
25
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
546960--547036
20
3.2
26
68
24
85
12
31
23
32
1.92
546944--547036
47
2.0
47
100
0
186
15
32
23
29
1.95
600775--600809
17
2.1
17
100
0
70
45
20
28
5
1.73
600811--600963
51
3.0
51
97
0
279
9
31
29
30
1.88
643818--643860
21
2.0
22
86
4
61
30
18
41
9
1.82
659665--659720
24
2.3
24
100
0
112
16
44
26
12
1.83
706695--706737
18
2.4
18
81
18
54
34
25
20
18
1.96
718385--718414
15
2.0
15
93
0
51
26
16
23
33
1.96

Tables:   1

The End!