Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: KT894205
Parameters: 2 7 7 80 10 50 500
Length:  1829341

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 502 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1733036--1733075
20
2.0
20
100
0
80
60
15
15
10
1.60
1733197--1733253
28
2.0
28
100
0
114
24
7
33
35
1.82
1739257--1739302
23
2.0
23
100
0
92
30
26
17
26
1.97
1739887--1739945
29
2.0
29
100
0
118
35
20
10
33
1.86
1742763--1742810
23
2.1
23
100
0
96
39
25
14
20
1.91
1743347--1743398
26
2.0
26
100
0
104
19
26
19
34
1.95
1745216--1745250
17
2.1
17
100
0
70
45
5
11
37
1.64
1760393--1760450
28
2.1
28
96
0
107
25
8
18
46
1.78
1765497--1765540
22
2.0
22
100
0
88
45
9
18
27
1.79
1768452--1768525
37
2.0
37
100
0
148
35
27
18
18
1.95
1776346--1776391
23
2.0
23
100
0
92
56
4
17
21
1.58
1788864--1788913
24
2.1
24
100
0
100
30
20
26
24
1.98
1790708--1790748
20
2.0
20
100
0
82
39
14
19
26
1.90
1791263--1791309
23
2.0
23
100
0
94
21
17
19
42
1.89
1798439--1798471
13
2.8
12
90
9
50
12
6
9
72
1.26
1805079--1805106
14
2.0
14
100
0
56
28
21
0
50
1.49
1805401--1805659
130
2.0
129
100
0
509
27
18
23
30
1.97
1807188--1807233
23
2.0
23
95
0
83
39
28
6
26
1.81
1812319--1812378
20
3.0
20
100
0
120
25
25
10
40
1.86
1816133--1816190
29
2.0
29
100
0
116
48
3
27
20
1.66
1822002--1822069
32
2.1
32
100
0
136
39
19
11
29
1.87
1824597--1824637
19
2.2
19
100
0
82
48
0
19
31
1.49

Tables:   1   2   3   4   5

The End!