Test Result of PMGmap
The test data used by PMGmap include:
1. All mitochondrial genome data including one chromosome in the former GenBank as of May 23, 2023, a total of 387 mitochondrial genomes;
2. As of May 23, 2023, all mitochondrial genome data containing multiple chromosomes in the former GenBank, a total of 18 species.
Here, we provide users with PMGmap test data and test results, including:
1. "input_mt_plant_single": 387 mitochondrial genomes containing one chromosome after "Preprocess" output files;
2. "input_mt_plant_motiple": output file of 18 mitochondrial genomes containing multiple chromosomes after "Preprocess" processing;
3. "input_mt_plant_motiple_original": the original file of 18 mitochondrial genomes containing multiple chromosomes before Preprocess processing;
4."outdir_OGDRAW": The output result file obtained for 387 mitochondrial genomes containing one chromosome using the original file not processed by "Preprocess" as the input file.
5."outdir_mt1", "outdir_mt2", "outdir_mt3":387 mitochondrial genomes containing one chromosome are respectively the output result files obtained by using the files processed by "Preprocess" and manually corrected as input files. The outdir_mt1, outdir_mt2, and outdir_mt3 parameters are different. The parameters of outdir_mt1 are: Interval_ratio of genome map=1, Scattered repeat sequence threshold=5000, Ratio of cis-trans splicing genes map=0.02, Whether choose to draw exons or not=Yes, Whether to draw the shadow or not=Yes; The parameters of outdir_mt2 are: Interval_ratio of genome map=0.2, Scattered repeat sequence threshold=5000, Ratio of cis-trans splicing genes map=0.02, Whether choose to draw exons or not=Yes, Whether to draw the shadow or not=No; The parameters of outdir_mt3 are: Interval_ratio of genome map=1, Scattered repeat sequence threshold=5000, Ratio of cis-trans splicing genes map=0.02, Whether choose to draw exons or not=No, Whether to draw the shadow or not=Yes
6."outdir_mt4": The output result file obtained by using Preprocess processed and manually corrected files as input files for 18 mitochondrial genomes containing multiple chromosomes.
Last updated: 2023/10/09
|
|---|
|
|---|
| BK059358.1.pdf |
| FP885845.1.pdf |
| FQ378026.1.pdf |
| JF920286.1.pdf |
| JF920287.1.pdf |
| JF973314.1.pdf |
| JX402749.1.pdf |
| KC784949.1.pdf |
| KC784951.1.pdf |
| KC784952.1.pdf |
| KC784954.1.pdf |
| KC784956.1.pdf |
| KC784958.1.pdf |
| KC784959.1.pdf |
| KP984758.1.pdf |
| KT894204.1.pdf |
| KT894205.1.pdf |
| MH545496.1.pdf |
| MK714017.1.pdf |
| MK759657.1.pdf |
| MT784750.1.pdf |
| MW080658.1.pdf |
| NC_001660.1.pdf |
| NC_002511.2.pdf |
| NC_006581.1.pdf |
| NC_007886.1.pdf |
| NC_007945.1.pdf |
| NC_007982.1.pdf |
| NC_008285.1.pdf |
| NC_008331.1.pdf |
| NC_008332.1.pdf |
| NC_008333.1.pdf |
| NC_008360.1.pdf |
| NC_008362.1.pdf |
| NC_010303.1.pdf |
| NC_011033.1.pdf |
| NC_012116.1.pdf |
| NC_012119.1.pdf |
| NC_012651.1.pdf |
| NC_013444.1.pdf |
| NC_013765.1.pdf |
| NC_013816.1.pdf |
| NC_014043.1.pdf |
| NC_014050.1.pdf |
| NC_014487.1.pdf |
| NC_015121.1.pdf |
| NC_016118.1.pdf |
| NC_016122.1.pdf |
| NC_016123.1.pdf |
| NC_016125.1.pdf |
| NC_016740.1.pdf |
| NC_016741.1.pdf |
| NC_016742.1.pdf |
| NC_016743.2.pdf |
| NC_017755.1.pdf |
| NC_017840.1.pdf |
| NC_017855.1.pdf |
| NC_018041.1.pdf |
| NC_018551.1.pdf |
| NC_018554.1.pdf |
| NC_020455.1.pdf |
| NC_021092.1.pdf |
| NC_021152.1.pdf |
| NC_021399.1.pdf |
| NC_022666.1.pdf |
| NC_022714.1.pdf |
| NC_022796.1.pdf |
| NC_023103.1.pdf |
| NC_023209.1.pdf |
| NC_023337.1.pdf |
| NC_023338.1.pdf |
| NC_024290.1.pdf |
| NC_024293.1.pdf |
| NC_024429.1.pdf |
| NC_024515.1.pdf |
| NC_024519.1.pdf |
| NC_024521.1.pdf |
| NC_024624.1.pdf |
| NC_025931.1.pdf |
| NC_026121.1.pdf |
| NC_026515.1.pdf |
| NC_026540.1.pdf |
| NC_026784.1.pdf |
| NC_026890.1.pdf |
| NC_026891.1.pdf |
| NC_026901.1.pdf |
| NC_026974.1.pdf |
| NC_026975.1.pdf |
| NC_027000.1.pdf |
| NC_027406.1.pdf |
| NC_027407.1.pdf |
| NC_027974.1.pdf |
| NC_027976.1.pdf |
| NC_028040.1.pdf |
| NC_028096.1.pdf |
| NC_028191.1.pdf |
| NC_028254.1.pdf |
| NC_028329.1.pdf |
| NC_029039.1.pdf |
| NC_029130.1.pdf |
| NC_029182.1.pdf |
| NC_029317.1.pdf |
| NC_029355.1.pdf |
| NC_029356.1.pdf |
| NC_029452.1.pdf |
| NC_029641.1.pdf |
| NC_029693.1.pdf |
| NC_029809.1.pdf |
| NC_029816.1.pdf |
| NC_029855.1.pdf |
| NC_029998.1.pdf |
| NC_030100.1.pdf |
| NC_030753.1.pdf |
| NC_030900.1.pdf |
| NC_031158.1.pdf |
| NC_031212.1.pdf |
| NC_031323.1.pdf |
| NC_031389.1.pdf |
| NC_031390.1.pdf |
| NC_031391.1.pdf |
| NC_031392.1.pdf |
| NC_031393.1.pdf |
| NC_031394.1.pdf |
| NC_031696.1.pdf |
| NC_031767.1.pdf |
| NC_031806.1.pdf |
| NC_031846.1.pdf |
| NC_031896.1.pdf |
| NC_034354.1.pdf |
| NC_034907.1.pdf |
| NC_035073.1.pdf |
| NC_035074.1.pdf |
| NC_035075.1.pdf |
| NC_035076.1.pdf |
| NC_035157.1.pdf |
| NC_035317.1.pdf |
| NC_035345.1.pdf |
| NC_035549.1.pdf |
| NC_035616.1.pdf |
| NC_035618.1.pdf |
| NC_035958.1.pdf |
| NC_035962.1.pdf |
| NC_035963.1.pdf |
| NC_035964.1.pdf |
| NC_035977.1.pdf |
| NC_035978.1.pdf |
| NC_035979.1.pdf |
| NC_035980.1.pdf |
| NC_036024.1.pdf |
| NC_036467.1.pdf |
| NC_036945.1.pdf |
| NC_037041.1.pdf |
| NC_037304.1.pdf |
| NC_037463.1.pdf |
| NC_037468.1.pdf |
| NC_037476.1.pdf |
| NC_037508.1.pdf |
| NC_037949.1.pdf |
| NC_038052.1.pdf |
| NC_038053.1.pdf |
| NC_038221.1.pdf |
| NC_039531.1.pdf |
| NC_039596.1.pdf |
| NC_039660.1.pdf |
| NC_039738.1.pdf |
| NC_039746.1.pdf |
| NC_039751.1.pdf |
| NC_039757.1.pdf |
| NC_039768.1.pdf |
| NC_039775.1.pdf |
| NC_040010.1.pdf |
| NC_040132.1.pdf |
| NC_040989.1.pdf |
| NC_040998.1.pdf |
| NC_041085.1.pdf |
| NC_041093.1.pdf |
| NC_041177.1.pdf |
| NC_042756.1.pdf |
| NC_042758.1.pdf |
| NC_042873.1.pdf |
| NC_042883.1.pdf |
| NC_043887.1.pdf |
| NC_043888.1.pdf |
| NC_043889.1.pdf |
| NC_043897.1.pdf |
| NC_043906.1.pdf |
| NC_043907.1.pdf |
| NC_043908.1.pdf |
| NC_043909.1.pdf |
| NC_043914.1.pdf |
| NC_044153.1.pdf |
| NC_044768.1.pdf |
| NC_045035.1.pdf |
| NC_045036.1.pdf |
| NC_045038.1.pdf |
| NC_045039.1.pdf |
| NC_045040.1.pdf |
| NC_045135.1.pdf |
| NC_045136.1.pdf |
| NC_045228.1.pdf |
| NC_046014.1.pdf |
| NC_046466.1.pdf |
| NC_046754.1.pdf |
| NC_046759.1.pdf |
| NC_046778.1.pdf |
| NC_047462.1.pdf |
| NC_048499.1.pdf |
| NC_048500.1.pdf |
| NC_048501.1.pdf |
| NC_048502.1.pdf |
| NC_048974.1.pdf |
| NC_049003.1.pdf |
| NC_049004.1.pdf |
| NC_049064.1.pdf |
| NC_049134.1.pdf |
| NC_049892.1.pdf |
| NC_050067.1.pdf |
| NC_050308.1.pdf |
| NC_050334.1.pdf |
| NC_050335.1.pdf |
| NC_050850.1.pdf |
| NC_050950.1.pdf |
| NC_050960.1.pdf |
| NC_051989.1.pdf |
| NC_051990.1.pdf |
| NC_052708.1.pdf |
| NC_052709.1.pdf |
| NC_052751.1.pdf |
| NC_052879.1.pdf |
| NC_052880.1.pdf |
| NC_053368.1.pdf |
| NC_053538.1.pdf |
| NC_053625.1.pdf |
| NC_053642.1.pdf |
| NC_053763.1.pdf |
| NC_053886.1.pdf |
| NC_053919.1.pdf |
| NC_053920.1.pdf |
| NC_053921.1.pdf |
| NC_053927.1.pdf |
| NC_054214.1.pdf |
| NC_054215.1.pdf |
| NC_054351.1.pdf |
| NC_054354.1.pdf |
| NC_056281.1.pdf |
| NC_056358.1.pdf |
| NC_056359.1.pdf |
| NC_056360.1.pdf |
| NC_056367.1.pdf |
| NC_056836.1.pdf |
| NC_056991.1.pdf |
| NC_057142.1.pdf |
| NC_057143.1.pdf |
| NC_057502.1.pdf |
| NC_057524.1.pdf |
| NC_057604.1.pdf |
| NC_057654.1.pdf |
| NC_058235.1.pdf |
| NC_058313.1.pdf |
| NC_058584.1.pdf |
| NC_058585.1.pdf |
| NC_058643.1.pdf |
| NC_058644.1.pdf |
| NC_058697.1.pdf |
| NC_058733.1.pdf |
| NC_058734.1.pdf |
| NC_058741.1.pdf |
| NC_058846.1.pdf |
| NC_058888.1.pdf |
| NC_059791.1.pdf |
| NC_059792.1.pdf |
| NC_059793.1.pdf |
| NC_059804.1.pdf |
| NC_060346.1.pdf |
| NC_060361.1.pdf |
| NC_060419.1.pdf |
| NC_060491.1.pdf |
| NC_060546.1.pdf |
| NC_060635.1.pdf |
| NC_060803.1.pdf |
| NC_060804.1.pdf |
| NC_060990.1.pdf |
| NC_060995.1.pdf |
| NC_061056.1.pdf |
| NC_062584.1.pdf |
| NC_062587.1.pdf |
| NC_062588.1.pdf |
| NC_062589.1.pdf |
| NC_062590.1.pdf |
| NC_062591.1.pdf |
| NC_062592.1.pdf |
| NC_062670.1.pdf |
| NC_062671.1.pdf |
| NC_062672.1.pdf |
| NC_062673.1.pdf |
| NC_062832.1.pdf |
| NC_062833.1.pdf |
| NC_062834.1.pdf |
| NC_063145.1.pdf |
| NC_063515.1.pdf |
| NC_063516.1.pdf |
| NC_063517.1.pdf |
| NC_063518.1.pdf |
| NC_063925.1.pdf |
| NC_064134.1.pdf |
| NC_064688.1.pdf |
| NC_064986.1.pdf |
| NC_065024.1.pdf |
| NC_065039.1.pdf |
| NC_065060.1.pdf |
| NC_065061.1.pdf |
| NC_065066.1.pdf |
| NC_065218.1.pdf |
| NC_065219.1.pdf |
| NC_065220.1.pdf |
| NC_065221.1.pdf |
| NC_065222.1.pdf |
| NC_065223.1.pdf |
| NC_065224.1.pdf |
| NC_065225.1.pdf |
| NC_065226.1.pdf |
| NC_065227.1.pdf |
| NC_065228.1.pdf |
| NC_065229.1.pdf |
| NC_065230.1.pdf |
| NC_065231.1.pdf |
| NC_065232.1.pdf |
| NC_065233.1.pdf |
| NC_065235.1.pdf |
| NC_065236.1.pdf |
| NC_065237.1.pdf |
| NC_065238.1.pdf |
| NC_065239.1.pdf |
| NC_065260.1.pdf |
| NC_065806.1.pdf |
| NC_065997.1.pdf |
| NC_066407.1.pdf |
| NC_066410.1.pdf |
| NC_066488.1.pdf |
| NC_066808.1.pdf |
| NC_066894.1.pdf |
| NC_066895.1.pdf |
| NC_066984.1.pdf |
| NC_067574.1.pdf |
| NC_067638.1.pdf |
| NC_067639.1.pdf |
| NC_067879.1.pdf |
| NC_067943.1.pdf |
| NC_068017.1.pdf |
| NC_068018.1.pdf |
| NC_068105.1.pdf |
| NC_068215.1.pdf |
| NC_068216.1.pdf |
| NC_068217.1.pdf |
| NC_068714.1.pdf |
| NC_068745.1.pdf |
| NC_068760.1.pdf |
| NC_068761.1.pdf |
| NC_068856.1.pdf |
| NC_068893.1.pdf |
| NC_069194.1.pdf |
| NC_069222.1.pdf |
| NC_069572.1.pdf |
| NC_069573.1.pdf |
| NC_069586.1.pdf |
| NC_069587.1.pdf |
| NC_069588.1.pdf |
| NC_069589.1.pdf |
| NC_069590.1.pdf |
| NC_069591.1.pdf |
| NC_069806.1.pdf |
| NC_070189.1.pdf |
| NC_070303.1.pdf |
| NC_071216.1.pdf |
| NC_071219.1.pdf |
| NC_071229.1.pdf |
| NC_071384.1.pdf |
| NC_071385.1.pdf |
| NC_071968.1.pdf |
| NC_071974.1.pdf |
| NC_072104.1.pdf |
| NC_072122.1.pdf |
| NC_072135.1.pdf |
| NC_072295.1.pdf |
| NC_072309.1.pdf |
| ON478172.1.pdf |
| ON482180.1.pdf |
|
|---|